Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1214 ATGGATGATGACAAAGATTTTGAGTTGTTATTTCACAGTTGGAATACCAAGAATCCAACTGATCGGCTTTTCATTATATCTTGTTTTGTTGCTGCACTTGTTGGAATTTTGACCATAGCCTACACCGCCTTTCAATGGAGGAGAAACATCAATCTAAGTTGGATGAAAGCCATAGCTAGATCTAAGAAAAACCCGAAAGCAAGGCACAAAATTCCTGTTGCTCCTCATACATGGGTTCTAGAATCTGTATCTCGTGCAAAGAATTTAAACTGCTGTGTATGCTTTAAGTCCATGTCACCCTCTCAAACTCTAGGACCCATAGTAGCTTCTGAAGGTTTCATCCACCGTTGCTGTATTTGTGGTGCAGTAGCTCATCTAAGCTGTTCCTCTAGTGCCCACAAGGACTGCAAGTGTGTTTCTATGATTGGATATGAGCATGTCATGCACCAATGGGCTGTTCGGTGGACAGATGTGGCTGACCAACCTGACGAAACTGCTCTCTGTAGTTACTGTGAAGAGCCATGTGGTGGGACATTCCTCAGTGGTTCCCCTATATGGTCTTGCTTGTGGTGTCAACGTTTAGTACACGTTGATTGTCATAGTACAATGTCTAATGAAACAGGTGATATTTGCGATTTTGGCCAATTTAGAAGATTGATACTATCACCACTGTATGTGAAGGAATTGAACTGGAACATGCCAGGTGGATTTTTGAGCTCAATTACTCATGGGGCAAATGAGATAGCATCTTCAGTTCGGGCAAGTATTAGGAGCCAGAGCAAAAAGTACAAGCATGGAAATGAACCATCTGTTGTTGAATCTGGGAATGGTGAGAGCATTGATGAAATGTCCACAGAAAGCACTGGTGCTTCTCGTCAAATAGAGAATGGTCATCATGaagtggatgaaaaaaatagcTCAAATAAGGAGGTTCGACATCAAGATAGTGAAGTAGAAAATAAGATGGATAGAAAACCCAGTCTTAGGCTCAATTCATCAATCAATCAGAAGGATGAGTCCCACACATTAGGAGTGAAGCAGAAATATGATTTGACTGATTTGCCTCCACATGCAAGACCattgttagtttttataaacaagAAGAGTGGTGCCCAGCGTGGAGACTCACTTAGAATGCGTCTGAATATCCTTTTAAATTCTGTTCAGgTGGTTGAATTGAGCTCAACACAGGGGCCAGAGATGGGACTTTATTTGTTTAGAAAGGTGCCTCACTTCAGAGTTCTTGTATGTGGGGGAGATGGTACTGTTGGTTGGGTTCTGAATGCAATAGACAAGCAAAATTTTGTTTCCCCTCCCCCGGTTGCTATTCTTCCTGCTGGTACAGGAAATGATCTTGCTAGAGTTCTCTCCTGGGGAGGTGGCTTGGGTCCAGTGGAGAGGCAAGGGGGTCTTAGTACATTTTTGCATCACATAGAACATGCTGCTGTTACTGTTCTTGACCGGTGGAAGGTAACAATTAGTAATCCACAAGGAAAGCAACAGTTGCAACCAACAAAGTTTATGAACAATTATCTTGGAATTGGTTGTGATGCAAAGGTTGCTTTGGACATTCATAATCTGCGTGAAGAGAATCCAGATAAGTTTTATAACCAGTTTATGAATAAAGTTCTATATGCAAGAGAAGGCGCTAAAAGTATTATGGATAGGACATTTGCGGATTTACCCTGGCAGATTCGAGTTGAGGTGGATGGAGTTGAAATTGAGGTCCCTGAGGATGCGGAAGGTGTGCTTGTTGCAAATATTGGAAGCTACATGGGAGGTGTAGATTTGTGGCAAAATGAGgatgaaaattatgataattttgatCAACAATCAATGCATGATAAGATACTTGAAGTTGTGAGCATATCTGGAACATGGCACCTCGGGAAGCTTCAGGTTGGGCTTTCTCGAGCTCGAAGACTTGCGCAAGGACAGTCAATTAAGATACAATTGTTTGCCATGTTTCCTGTTCAGATTGATGGAGAGCCTTGGTTTCAGCAACCCTGCACAATTTCCATAACCCATCATGGCCAGGCTTTCATGTTGAAGAGGGTGGCTGAGGAACCTCTAGGTCCTGCATCTGCAATAATCACTGATGTGCTTGAGAATGCTGAaacaaataatgtaattaatgctTCACAAAAGCGAGCTCTTCTTCATGAAATGGCACTGAGGCTGTCCTAG 2187 0.4129 MDDDKDFELLFHSWNTKNPTDRLFIISCFVAALVGILTIAYTAFQWRRNINLSWMKAIARSKKNPKARHKIPVAPHTWVLESVSRAKNLNCCVCFKSMSPSQTLGPIVASEGFIHRCCICGAVAHLSCSSSAHKDCKCVSMIGYEHVMHQWAVRWTDVADQPDETALCSYCEEPCGGTFLSGSPIWSCLWCQRLVHVDCHSTMSNETGDICDFGQFRRLILSPLYVKELNWNMPGGFLSSITHGANEIASSVRASIRSQSKKYKHGNEPSVVESGNGESIDEMSTESTGASRQIENGHHEVDEKNSSNKEVRHQDSEVENKMDRKPSLRLNSSINQKDESHTLGVKQKYDLTDLPPHARPLLVFINKKSGAQRGDSLRMRLNILLNSVQVVELSSTQGPEMGLYLFRKVPHFRVLVCGGDGTVGWVLNAIDKQNFVSPPPVAILPAGTGNDLARVLSWGGGLGPVERQGGLSTFLHHIEHAAVTVLDRWKVTISNPQGKQQLQPTKFMNNYLGIGCDAKVALDIHNLREENPDKFYNQFMNKVLYAREGAKSIMDRTFADLPWQIRVEVDGVEIEVPEDAEGVLVANIGSYMGGVDLWQNEDENYDNFDQQSMHDKILEVVSISGTWHLGKLQVGLSRARRLAQGQSIKIQLFAMFPVQIDGEPWFQQPCTISITHHGQAFMLKRVAEEPLGPASAIITDVLENAETNNVINASQKRALLHEMALRLS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1214 728 MobiDBLite consensus disorder prediction 293 326 - -
Ssu6g1214 728 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 359 681 IPR016064 -
Ssu6g1214 728 Gene3D - 147 207 - -
Ssu6g1214 728 MobiDBLite consensus disorder prediction 272 292 - -
Ssu6g1214 728 PANTHER DIACYLGLYCEROL KINASE 17 728 IPR037607 GO:0004143|GO:0007165
Ssu6g1214 728 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 356 495 IPR001206 GO:0016301
Ssu6g1214 728 SUPERFAMILY Cysteine-rich domain 145 214 IPR046349 -
Ssu6g1214 728 Pfam Phorbol esters/diacylglycerol binding domain (C1 domain) 149 209 IPR002219 -
Ssu6g1214 728 Gene3D - 357 488 IPR017438 -
Ssu6g1214 728 PANTHER DIACYLGLYCEROL KINASE 17 728 - -
Ssu6g1214 728 Pfam Diacylglycerol kinase accessory domain 508 664 IPR000756 GO:0004143|GO:0007205
Ssu6g1214 728 Gene3D - 505 675 - -
Ssu6g1214 728 MobiDBLite consensus disorder prediction 259 343 - -
Ssu6g1214 728 Pfam Diacylglycerol kinase catalytic domain 360 460 IPR001206 GO:0016301
Ssu6g1214 728 SMART dagk_c4b_2 507 664 IPR000756 GO:0004143|GO:0007205
Ssu6g1214 728 SMART c1_12 76 136 IPR002219 -
Ssu6g1214 728 SMART c1_12 149 211 IPR002219 -
Ssu6g1214 728 SMART dagk_c4a_7 360 489 IPR001206 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1214 Ssu-Chr6 19861557 19867388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1214 1 728 Acyl Lipid Metabolism Gene Families AT5G07920 74.659 0.0 1129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1214 K00901 - gmx:100794891 1408.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1214 6 19861557 19867388 Ssu6g1214 6 19861557 19867388 ECH