Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1212 ATGCCTGGAAACGAAGTAGGAGACAGGgtccataatttttttggtcaagAGAACTTGTCCCAGGGCCAGTATCATTCACAGGCAGTTGACGGGAACTGGCCAGGGCTAAGCAACAATTTGTGGGCTGGTAGCCAGAGACCAACTGGTGCACCTTTTATTTccaatttgaagaattttaatCTACAGCAATCAGATTTTGAGCAGGGACACACAAGCACTCCACATTTGCGACATGGTTTGAACCTGGCACAATCAAATTTGAGGCCTGACTCTGGCAGAAATCAGCTCCCAAACCAACAGACAGTTGTAAATGGCTATATGCAGGGACCTCAGGTTTTTCAGTCTAGGCAAAATGAAGCAAACATTTTGGGATTGGATACAGAAACTGATTTGCATGGCATATCAAATCTGTCAAGAGGAATATCAGTACTAGAGTCACAACAAGGGACTGGTCTTGAACACTATAAGAAAAACTTGACTAGGACTGATGCATCTGAGTCTCCTgtcaattatgatttttttggaAGTCAACAGCAAATGAGTGGTCGGCATTCAGGCATGCTTCAGTCTTTTTCTAGACAGCAGTCAGGGATGAATGACATGCAGCTTTTACAACAGCAAGCAATGCTCAACCAGATGCAAGAACTTCAAAGGCAgcaacaatttcatcaactaGAAGCTAGGCAACAAAGTTCTATAAATCCAGCTTCCTCCATTTCAAAACAGACAGTTGCAAGCCATTCTGCATCTCTTATTAATGGCATTCCCATCAATGAGGCATCTAACCTTTTGTGGCAGCAGCCTGAAGTTATGGCAACTAATGCAAATTGGCTCCAGCATGGTGCATCTCCAGTTATGCAAGGGTCCTCTAATGGACTTGTGTTATCTCCCGAACAACTGCGCCTGATGGGTTTGGTTCCTAATCAAGGAGACCAGTCTCTGTATGGGCTTCCAATTTCTGGCTCAAGAGGTACACCTAACCTGTATTCTCACATTCAAGCGGATAAGCCTGCAGTGTCTCAGGTTTCTATCCAAAATCAACATCAACATCAGTATTCTCGCATTCAAGGTGACAAGCCGACATTACCACACATATCAGCCAGTGGTCATTCATTTCCAGTTCATCAGTATGCTTCAATTTCAGATCAAACTAACACAAATGATGGAACTTCAGTTTCAAGACAGGATATTCAAGGAAAAAGTATGTTTGGTTCTCTTGCTCAAGGTATAAACAGTGGACTAAATATGGAGAACTTGCAGCAAGTGAATTCTGAGCAAAGAGATGTACCAATTGAAGATTTTAATGGGAGGCAAGAACTAGCTGGATCTTCTGACACTTCACAGGACAAGGTGGCAGGGCAGGTTCCTCCTTCACAGAATGTGGCTACCCTAGATCCAACAGAAGAGAAGATTTTATTTGGTTCAGATGACAGCCTTTGGGATGGATTTGGTTGGAATGCTGGTTTCAATATGCTGGACAGTACGGATAGTCTTGGTGGAGTTCCATCAGTTCAGAGTGGGAGTTGGAGTGCACTTATGCAGTCTGCTGTAGCTGAAACTTCTAGTAATGAAATGGGTATACAGGAAGAATGGAGCGGTCTAAGTTTCCGGAATACTGAACGTTCATCTGGAAGTGAGCGGCCTTCAACCATTGATAGCAGCAAACAGCAATCAGTTTGGGCTGACAATAACTTGCAATCAGCACCCAATATAAATTCAAGGCCTTTTCTTCGGCCGGATGATCTCAGCAGGCCCAATACCGCTGTAAACTATTCTGGTCTTCCTGGATTTCATCAATCAGGTGCTGATACTGCACAGGAACAGCAAGACAGGTTACAGACTGATTCTTCTCAAAGATCAATTCCACAGTTTTTAGAAAGAGGTAAATGGTTAGATTGCAGTCCTCAGCAAAAACCAATTGCAGAAGGGAGTCATGTTTATGGAAATGCTGCTAATACCTCAGGTTTAGAAGTAAATGAGAAGGTTATTTCAGGTTCTTGGACCCATCAGCAGACACTATCATCCCCTAATAGTAGGGGTGAGCCATTCAATAGATCTAATGGATGGAATGCTATCAAATCACCCACACCCAATAACAATTCTAATATGAAAATCCGtgaaaatgaaaacatgttGCAGCCTCATCCTGATAAAGCTATGCAAGAGGATATGGGCCAGGTTCCTGCAATGTGGGAGCCTGATTCTGATACTAATTCATCTGTTGGGTTTGAACATGCAAAGTCACCAGGTAATATGCAGGTTTGTGGGGAGGATTCTGGTATGAATGGTATCGCTGCCATACCAAATTCAGGTGCTACATGGGTCAGCAGGCAAAGCAACCAGCAGCTCCCTCATGTTGATGTATGGAGACATACAGATTCTGTGGGGAGCTATAGAAGAAATGAAGGTGCAGGAAAATATAGGCATCATATGGAGAAGAATCCTTTAGTTTTGGAAtcattgaagaatgaaaagTCAGAAGGAGAGGCACATGATATGGAAAACTCTAACAAAAAGGATAAATCAGCAGATGGTCTTGTCTCTAATTCTTCTCATCATAGAACTGGTGGTTTGAGAGAAAATCCCAGTTCTGATGGTGATTTGCATAGTCCAAAGTTATCTGGGCAGGGAAACAGAAGACCTCCTGTAACTCGTAAATTTCAGTATCACCCAATGGGGGATGTTGGTGTTGACATAGAACCTTATGGAAACAAACATGTCATAAATTCACAGCCTATGCCCCATCAGCCCATTGGAGGGCTTAAAGGTCAGGACCAAAGCTATCCTGGGCAGTCAAAATTCAGTCATTCTGATGGGAATTATAATGAAACAGAGAAGGGTGACTCAAAAACCATAGATGATAATGCTTCAAAAAGCATGCTGCCTGGTCATATACCCAAAACATTGACTCCATTTGATAGAAGTGTTGGTAATTATGCCTTGAACAAGACTGCTTCACCCAGTCAAAATATTCTTGAGCTTCTTCATAAAGTGGATCAGTCAAGGGAGCATGGCATTGCAACAAACACAAGCACTTCTAACCGCCCTTTATCTTCCAGGGTGATGGATACTGAATCTTCTGATGGGTCTGTTGGACATCCTCAACGAAATCAAAGTTCTTTGTCTCAGGGCTTTGGTTTACAATTGGCTCCTCCTACTCAAAGGGTTCCTCTGGCATCTTCTCATGCTACACCACATGTTGCATCTGAGACAGGGGATAAGGGTCATGCTTGGTTGGCTGCTACTCAGACTTTTCCTTCTCGAGAGTCATCTCATGAGCTTAGAAATAACATTTCTGGTTCCTCAGGACAAATATTTGACAAAGCCTCACAGTACAGTGCACTGGGAAATATTCCACAGGCTTTCACTTCAGGCTTTCCTTTTTCAAGGATCCATACTCAAAACCAGAATGTGGCTAATCTTGGTGGACAAATAGTGAATACCCAATGTGATAATGCTACTTTTGTTGATCAGACTGCTTCCACTAATCAGGTAGATGAATATTGTGAAAGAGCTCAAACTAGTCAATCTGAATTGCAATCTGCTCGGGACATGTCCCAGATGGATGGTATGAATCAAATCCGTGCTGGAGATCCTCCCATGAAAATTTCGTCATTGGAGGCTGGCACAGCTCCTCATTCTTCAGTTACATCATCTCTACAGGGCACCCCTTCAAAAGTTCTACACAATGTGTGGACAAGTGTTTCTAGCAAGCAACATCCTAATGCTTTGAAGATTCCATCCCATCCCCAACGAATTAATATTTGTGAAACTACAACAGGATCACACAAGCCAGGTATTGAATATTCAGAAAAAGATGGTAACCTTTCTGGGCAGCGGGTATTGCCTGAGATTGTTGATGCTGTTGAAGAGACTGCAAGTGCTTCACATGTGAAATGTACACCTGATGCATCTCAATCAAGCCCAGCTGCTACCTCTAAAGATATTGAAGATTTTGGCCGGTCTTTAAGACCAAACAATTTTTTGCATCAGAATTTCTCTATGCTAAATCAAGTTCAGTCCGTGAAAAATATGGAGATTGATCCTAGCAATCGAGATGTCAAGAGATTCAAGGTTTCAGATAATGTGATGGACAAACAACAGGTAGATTCCAACCGTGGACAACAGTCACATGGATACAATAACATGGTCAAAGATGTGTTGGGTAATAGTTCTTCAGTGCCACCATCAGATCTGAACTTACTAAACTTTTCAACAAAGCCAGGTGACGCACGAGACACTAATGCATCTTCTCAGGAGGTGGTTGGATATGGTCAGAGAAATGCTCTTAATGTTGCTAATAATAACAAAGTAACTACTGTTAGAAGCGAGCATTCTGTGATAAATCCTCAGATGGCTCCATCATGGTTTGAGCAGTATGGaacttttaaaaatggtaaGATGTTGCAAATGTACGATGTACGAACAATGACTCCTCAAAAAGTTATGGAGCAGCCTTTAATAAGGAATCAATCTGGTAGTCTGCATCTTGCTAATTCAATGGAGCAAGTTAATAGTCTCAGTGATGCTGGTCATGCTGGGCAAAATCCAATGCTTACTTCAGTTGCAAGTGAGCATCTGCCTTCTCAGTTATTGCTTCCTCCTGCAGTTGAACCTGATCTGTCTAGTATGCGACCAAAGAAGCGTAAAAGTTCCACATCTGAACTCATACCATGGCATAAAGAGCTGATTCAGGGTTCTGAAAGGCTTCAAGATATCAGTGTGGCAGAATTAGACTGGGCCCAAGCTGCAAATAGATTGATTGAGAAGGTTGAGGATGATGCCGAGCTAGTTGAAGATTTGCCAACGATGAAGTCAAAAAGAAGACTTGTGTTAACAACACAGCTTATGCAGCAACTACTAAACCCCCCTCCAGCTGCAGTTCTCTCTGCAGATGTCAAGTTGCATCATGAAAGTGTGGTCTACTCTGTTGCTAGATTAGTGTTAGGAGATGCATGCAGTTCCGTCTCTTGGTCTGGAAATGACACGCCTATGTCCCCTGACAGCAAAAACCTCCTGCCTGATAAGCTCAAAGCATCTGAGAAAATTGATCAGTACATTTTGAAAGTGGAAGACTTTGTTGGTAGAGCAAGGAAACtggaaaatgatatattgagATTGGATAGCAGAGCCTCAATTTTGGACTTAAGAGTGGAATGTCAGGATTTAGAAAGATTTTCTGTCATCAATCGATTTGCCAAGTTCCATGGTCGGGGGCAAAATGATGGGGCAGAAACCTCATCCTCTGATGCAACTGCAAATGCTCAGAAATCATGCCCCCAGAAATATGTTACTGCAGTTCCAATGCCTAGAAATCTCCCAGACAGGGTACAATGTCTTTCactttga 5349 0.416 MPGNEVGDRVHNFFGQENLSQGQYHSQAVDGNWPGLSNNLWAGSQRPTGAPFISNLKNFNLQQSDFEQGHTSTPHLRHGLNLAQSNLRPDSGRNQLPNQQTVVNGYMQGPQVFQSRQNEANILGLDTETDLHGISNLSRGISVLESQQGTGLEHYKKNLTRTDASESPVNYDFFGSQQQMSGRHSGMLQSFSRQQSGMNDMQLLQQQAMLNQMQELQRQQQFHQLEARQQSSINPASSISKQTVASHSASLINGIPINEASNLLWQQPEVMATNANWLQHGASPVMQGSSNGLVLSPEQLRLMGLVPNQGDQSLYGLPISGSRGTPNLYSHIQADKPAVSQVSIQNQHQHQYSRIQGDKPTLPHISASGHSFPVHQYASISDQTNTNDGTSVSRQDIQGKSMFGSLAQGINSGLNMENLQQVNSEQRDVPIEDFNGRQELAGSSDTSQDKVAGQVPPSQNVATLDPTEEKILFGSDDSLWDGFGWNAGFNMLDSTDSLGGVPSVQSGSWSALMQSAVAETSSNEMGIQEEWSGLSFRNTERSSGSERPSTIDSSKQQSVWADNNLQSAPNINSRPFLRPDDLSRPNTAVNYSGLPGFHQSGADTAQEQQDRLQTDSSQRSIPQFLERGKWLDCSPQQKPIAEGSHVYGNAANTSGLEVNEKVISGSWTHQQTLSSPNSRGEPFNRSNGWNAIKSPTPNNNSNMKIRENENMLQPHPDKAMQEDMGQVPAMWEPDSDTNSSVGFEHAKSPGNMQVCGEDSGMNGIAAIPNSGATWVSRQSNQQLPHVDVWRHTDSVGSYRRNEGAGKYRHHMEKNPLVLESLKNEKSEGEAHDMENSNKKDKSADGLVSNSSHHRTGGLRENPSSDGDLHSPKLSGQGNRRPPVTRKFQYHPMGDVGVDIEPYGNKHVINSQPMPHQPIGGLKGQDQSYPGQSKFSHSDGNYNETEKGDSKTIDDNASKSMLPGHIPKTLTPFDRSVGNYALNKTASPSQNILELLHKVDQSREHGIATNTSTSNRPLSSRVMDTESSDGSVGHPQRNQSSLSQGFGLQLAPPTQRVPLASSHATPHVASETGDKGHAWLAATQTFPSRESSHELRNNISGSSGQIFDKASQYSALGNIPQAFTSGFPFSRIHTQNQNVANLGGQIVNTQCDNATFVDQTASTNQVDEYCERAQTSQSELQSARDMSQMDGMNQIRAGDPPMKISSLEAGTAPHSSVTSSLQGTPSKVLHNVWTSVSSKQHPNALKIPSHPQRINICETTTGSHKPGIEYSEKDGNLSGQRVLPEIVDAVEETASASHVKCTPDASQSSPAATSKDIEDFGRSLRPNNFLHQNFSMLNQVQSVKNMEIDPSNRDVKRFKVSDNVMDKQQVDSNRGQQSHGYNNMVKDVLGNSSSVPPSDLNLLNFSTKPGDARDTNASSQEVVGYGQRNALNVANNNKVTTVRSEHSVINPQMAPSWFEQYGTFKNGKMLQMYDVRTMTPQKVMEQPLIRNQSGSLHLANSMEQVNSLSDAGHAGQNPMLTSVASEHLPSQLLLPPAVEPDLSSMRPKKRKSSTSELIPWHKELIQGSERLQDISVAELDWAQAANRLIEKVEDDAELVEDLPTMKSKRRLVLTTQLMQQLLNPPPAAVLSADVKLHHESVVYSVARLVLGDACSSVSWSGNDTPMSPDSKNLLPDKLKASEKIDQYILKVEDFVGRARKLENDILRLDSRASILDLRVECQDLERFSVINRFAKFHGRGQNDGAETSSSDATANAQKSCPQKYVTAVPMPRNLPDRVQCLSL 1782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1212 1782 Coils Coil 206 226 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 585 617 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 1002 1048 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 1298 1313 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 825 847 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 939 953 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 1004 1048 - -
Ssu6g1212 1782 PANTHER SIALOPHOSPHOPROTEIN-LIKE PROTEIN, PUTATIVE-RELATED 1013 1782 - -
Ssu6g1212 1782 PANTHER SIALOPHOSPHOPROTEIN-LIKE PROTEIN, PUTATIVE-RELATED 1 988 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 439 461 - -
Ssu6g1212 1782 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 1 988 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 520 617 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 520 573 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 825 966 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 667 704 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 346 369 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 1294 1315 - -
Ssu6g1212 1782 MobiDBLite consensus disorder prediction 438 461 - -
Ssu6g1212 1782 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 1013 1782 - -
Ssu6g1212 1782 Coils Coil 1581 1601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1212 Ssu-Chr6 19834897 19842685 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1212 - - ccaj:109809249 3208.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1212 6 19834897 19842685 Ssu6g1212 6 19834897 19842685 ECH