Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1194 ATGGCTTCCTCGCTCAGTTTGGcaccttttctatttctattgcTTGTTATTGGGTGCACTGCAAGGCCTTTGTATCCACTTCCCAGCAAAGGTGATGATGGAAGTAGGAAACTCCGACAAACTTTTCGCCCATATAACATTGCACATCGCGGTTCCAATGGAGAACTTCCTGAAGAAACTCGTCCTGCATACATGAGAGCTATTGAAGAAGGTGCAGACTTCATTGAAACTGATATCTTATCATCCAAAGATGGTTTTCTTATATGTTTCCATGATGCTACCCTTGATAATACCACTGACATTGCAAAACACAAAGAGTTTGCTAATCGTAAAAGAACATATGAAGTCCAAGGGGAAAACATCACTGGCTTTTTTACTGTTGATTTCACAATAAAGGAATTAAAGTCATTGAGGGTGAGACAGAGGTTTAGCTTCAGGGACCAACAGTATAATGGAAAGTTTCAAATCATCACTTTCGAAGAGTTCATTACCATAGCACTGGATGCACCCAGAGTTGTTGGAATATATCCAGAGATAAAATATCCAGTATTTATCAATCAACATGTGAAATGGTCGCATGGCAAAAGATTTGAGGACAAGTTTGTGGAGACACTTCAGAAATATGGGTACAAGGGTTCCTACCTGTCAAAAGATTGGTTGAGACAACCTGTATTTGTTCAGTCACTTGCTCCAACTTCACTCGTGTATATATCCAATAAAACGGATTTGCCCAAGATTTTCTTAATTGATGATGTTACTGTTCCAACGCAAGACACTAATCAGTCATATTGGGAGATTACATCTGATAAATACCTAGACTACATCAAGCAATTTGTTGTGGGAATTGGACCTTGGAAGGACACGGTGGTACCAGTGGTAAATAACTATATGATAAATCCTACTAATCTTGTTGCCAGGGCACATGCTCATAACCTGCAGGTGCATCCATATACTTACCGAAATGAGAACCAGTTTTTGCACTTCAACTTCTGTCAAGATCCGTATATGGAGTATGATTACTGGATCAACCAGATAGGGGTTGATGGTCTCTTTACAGACTTCACTGGTAGTCTTCATCATTTTCAGGAATGGACCTCTAAGAAGACTGAATCCAAGCTATTGCATAAAATTGCTTTGTTGGTCTCCTCTTATAAATGA 1158 0.3877 MASSLSLAPFLFLLLVIGCTARPLYPLPSKGDDGSRKLRQTFRPYNIAHRGSNGELPEETRPAYMRAIEEGADFIETDILSSKDGFLICFHDATLDNTTDIAKHKEFANRKRTYEVQGENITGFFTVDFTIKELKSLRVRQRFSFRDQQYNGKFQIITFEEFITIALDAPRVVGIYPEIKYPVFINQHVKWSHGKRFEDKFVETLQKYGYKGSYLSKDWLRQPVFVQSLAPTSLVYISNKTDLPKIFLIDDVTVPTQDTNQSYWEITSDKYLDYIKQFVVGIGPWKDTVVPVVNNYMINPTNLVARAHAHNLQVHPYTYRNENQFLHFNFCQDPYMEYDYWINQIGVDGLFTDFTGSLHHFQEWTSKKTESKLLHKIALLVSSYK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1194 385 CDD GDPD_ScGlpQ1_like 44 355 - -
Ssu6g1194 385 PANTHER OS01G0763600 PROTEIN 1 384 - -
Ssu6g1194 385 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 361 IPR017946 GO:0006629|GO:0008081
Ssu6g1194 385 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 1 384 - -
Ssu6g1194 385 ProSiteProfiles GP-PDE domain profile. 44 362 IPR030395 GO:0006629|GO:0008081
Ssu6g1194 385 SUPERFAMILY PLC-like phosphodiesterases 44 359 IPR017946 GO:0006629|GO:0008081
Ssu6g1194 385 Pfam Glycerophosphoryl diester phosphodiesterase family 49 356 IPR030395 GO:0006629|GO:0008081
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1194 9 384 Acyl Lipid Metabolism Gene Families AT1G74210 72.775 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1194 K01126 - gmx:100778145 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1194 6 19494199 19498137 Ssu6g1194 6 19494199 19498137 ECH