Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1169 ATGGGAAGGACACGTATCAGGTTGTGCATCGGTCTCGCCACGCCTCGTGTTCGAGCCTGTTCCGCATCTTCTTTTCGATCCAAGTCCTCCTCTTCTACTTCTATCAAATATGCAAACAGAACTGAGTTTTCAAGCAACGGAGGCCACATAGACAAGGGAACTGAAACGGGCAATAAGATAATGGTGGTTGTGGATTCTAGCTTTGAAGCTAAAGGGGCTCTTGAATGGGCACTCTCTCACACTGTTCAGAGCCAGGACACTGTTGTTCTAGTCCATGTAACCAGGCCCACCAGGGAAGGTACGGAATCTGGTGAGAAGTTTAATGTGAAGGCTTATCAACTTCTCCTTGATATGAAAAGTGTGTGCGAAATGAAGAGACCCGGGGTGCTAGTGAATGTAGTCATGCTTGAAGGAGAGGAAAAGGGTGTTGCAATAGTGCAAGAGGCAAAGCAACAGAGGGTGTCATTATTGGTTGTGGGACAAAGAAAGCGATCCATTTTGTGGTGCATCATGCGGAGGTGGGTACGAAAGGGAACGAGAGCTGGGGTCGTCGAGTATTGTATACAGAACTCGCCCTGCATGACCATTGCGGTGAGGAGGAAGAATAAGAAACTTGGGGGCTACTTGATTACTACCAAACGCCATAAAAATTTTTGGCTTTTGGCTTAA 669 0.4709 MGRTRIRLCIGLATPRVRACSASSFRSKSSSSTSIKYANRTEFSSNGGHIDKGTETGNKIMVVVDSSFEAKGALEWALSHTVQSQDTVVLVHVTRPTREGTESGEKFNVKAYQLLLDMKSVCEMKRPGVLVNVVMLEGEEKGVAIVQEAKQQRVSLLVVGQRKRSILWCIMRRWVRKGTRAGVVEYCIQNSPCMTIAVRRKNKKLGGYLITTKRHKNFWLLA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1169 222 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 58 202 - -
Ssu6g1169 222 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 222 - -
Ssu6g1169 222 CDD USP_Like 59 198 - -
Ssu6g1169 222 Pfam Universal stress protein family 59 199 IPR006016 -
Ssu6g1169 222 Gene3D HUPs 57 207 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1169 Ssu-Chr6 19036032 19037002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1169 52 165 Receptor kinase-like Gene Family AT1G17540 24.576 4.47e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1169 - - gmx:100527308 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1169 6 19036032 19037002 Ssu6g1169 6 19036032 19037002 ECH