Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1164 ATGCAGCATTTCGTGGATTTGCAAGATAGTTCAGAGTTGGGTGAGCCGAATTCATGGCTTTCAGCGAAAGAGCACTCGTTATCGTCCGCTGCGGCACCCAATACCAATTTGGATCGCGTCCTCTTCAACGACCTCGTCGAGATTGTCCCTCTCGTTCAGTCACTCATCgATCGTAAAGCAAGCCGTTCATTCACGCGGCGTGGTTCCATGATCTACACCAAGACACCTACAAGAGAATCGTTGTCTAAAAGAGCAATAGATTCAAAGAGTAGGAATGTTTCTCAATCTATTCCtgccaaaaagaaaagggaCCATGGAGAAAAAGAACAAGGGAAAAATGACAGCAATGATGCTGATAGCTATTCCATGTTTTCTTCAAGAGGTTTGGCTTCGGAAAAGGACATAGAAGAGTTAGGTATGTTGAAGGAGCAGGTAGAGGAACTTCAGAGGAAATTGTTGGAGAAAGATGAACTTTTAAAGTCAGCAGAAAACTCAAGAGACCAGATGAATGCTTTTAATGCAAAACTCGGTGAACTGAAACACCAGGCTTCAGAAAAGGACTCTTTACTGAAGTATACTCAACAGCAGCTCTCTGACGCTAAGATTAAGCTTGCAGACAAGCAAGCTGCTCTTGAAAAGATAGAATGGGAAGTGATGACATCCAACAAGAAAGTAGAGAAACTCCAAGATGAGCTAGATTCCATGCAAGCAGATATTTCATCATTCACGTTATTACTGGAAGGATTGACAAAAACTGACACTGCTAAATACAGCGATGATTATGACATCAAACCCTATGATTTCAGTCACCTGCCTAATATTGATGATTTGGACGAGATGGAAATGCAGAAAATGGAAGAAGCAAGAAATGCTTATATGACTGCTGTTACCATTACCAAGGACAAACGAGATGAGGAATCTATTGCTGCTGCTGCCAATGCTAGGTTACATCTTCAGTCACTTGTTTTcaaatccaaaaattttaacatgtaa 993 0.3998 MQHFVDLQDSSELGEPNSWLSAKEHSLSSAAAPNTNLDRVLFNDLVEIVPLVQSLIDRKASRSFTRRGSMIYTKTPTRESLSKRAIDSKSRNVSQSIPAKKKRDHGEKEQGKNDSNDADSYSMFSSRGLASEKDIEELGMLKEQVEELQRKLLEKDELLKSAENSRDQMNAFNAKLGELKHQASEKDSLLKYTQQQLSDAKIKLADKQAALEKIEWEVMTSNKKVEKLQDELDSMQADISSFTLLLEGLTKTDTAKYSDDYDIKPYDFSHLPNIDDLDEMEMQKMEEARNAYMTAVTITKDKRDEESIAAAANARLHLQSLVFKSKNFNM 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1164 330 MobiDBLite consensus disorder prediction 75 123 - -
Ssu6g1164 330 Coils Coil 131 182 - -
Ssu6g1164 330 PANTHER PROTEIN MICROTUBULE BINDING PROTEIN 2C 1 324 - -
Ssu6g1164 330 MobiDBLite consensus disorder prediction 97 115 - -
Ssu6g1164 330 Coils Coil 197 245 - -
Ssu6g1164 330 PANTHER PROTEIN MICROTUBULE BINDING PROTEIN 2C 1 324 IPR040289 GO:0008017|GO:0010497
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1164 Ssu-Chr6 19004355 19008130 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1164 - - gmx:100806411 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1164 6 19004355 19008130 Ssu6g1164 6 19004355 19008130 ECH