Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1148 ATGCATCTACACGGGACACCGTCTGCTCTTGGATTCCACATGCCTGCAGAGTGGGAAACCCACGCGCAGTGTTGGATGGGTTGGCCTGAACGCGCCGATAATTGGCGAGACGGTGCCGTTCACGCCCAACGTGTGTTTGCCAGGGTAGCATCTGCGATCTCAAGATTCGAGTCTGTAACTGTTTGTGTTAGTTCTGCACAGTGGGAGAATGCGCGGAGTCAGCTACCAGAACACATCAGGGTCGTTGAGATGAGTATGAATGATTCTTGGTTTCGTGATACTGGACCCACTTTTGTTGTGAGAAGAAGCACGACGCCGGAATCTGGTGATGCAGTTGACAGGATTGCGGGGATTGATTGGAATTTTAATAGTTGGGGAGgTTTGGAAGATGGATGTTACAGTGATTGGAGTCTTGATTTGCTTGTGGCTAAGAAGATTTTGGAGATTGAGAAGATTCCTAGATTTTCCCATTCCATGGTGCTTGAAGGTGGAAGCATCCATGTGGATGGAGAAGGAACTTGTCTTACCACAGAAGAGTGCCTCTTGAACAAGAACAGGAACCCTCACTTGAGTAAGAACCAAATAGAGGATGAACTTAAGGCATATCTTGGAGTCAGGAAGATTATATGGTTGCCTCGTGGATTATATGGAGATGATGATACAAATGGTCATATTGATAACATGTGCTGTTTTGTGCGGCCTGGTGTGGTTCTGCTGTCTTGGATCGATGATGAAACTGATCCTCAGTATGAAAGATCTGTAGAAGCATTCTCTTTGCTTTCAAGTGAAACAGACGCTAATGGTAGAAAGTTTGAAATCATTAAACTCCATGTTCCTGGTCCACTCTATATGACAGAGAAAGAGGCTGCTGGGATTTCTCAGGATTATGAGGCTAAGCCAAGACTTCAAGGTTCTAGGCTTGCTGCTTCctatgtaaatttttacattgcaAATAAAGGTATCATTGCACCACAATTTGGAGATAAAAAGTGGGATGATGAAGCTGTCCGAGTCCTATCTAAGGCCTTCCCTCATCATGAAGTTGTGGGAATTGAAGGTTCCAGGGAGATTGTTTTGGGCGGTGGAAATATACACTGCATTACTCAGCAACAACCAACCATTTGA 1125 0.4436 MHLHGTPSALGFHMPAEWETHAQCWMGWPERADNWRDGAVHAQRVFARVASAISRFESVTVCVSSAQWENARSQLPEHIRVVEMSMNDSWFRDTGPTFVVRRSTTPESGDAVDRIAGIDWNFNSWGGLEDGCYSDWSLDLLVAKKILEIEKIPRFSHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLSKNQIEDELKAYLGVRKIIWLPRGLYGDDDTNGHIDNMCCFVRPGVVLLSWIDDETDPQYERSVEAFSLLSSETDANGRKFEIIKLHVPGPLYMTEKEAAGISQDYEAKPRLQGSRLAASYVNFYIANKGIIAPQFGDKKWDDEAVRVLSKAFPHHEVVGIEGSREIVLGGGNIHCITQQQPTI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1148 374 Hamap Agmatine deiminase [aguA]. 5 373 IPR017754 GO:0009446|GO:0047632
Ssu6g1148 374 PANTHER AGMATINE DEIMINASE-RELATED 2 373 IPR007466 GO:0004668|GO:0009446
Ssu6g1148 374 SUPERFAMILY Pentein 3 373 - -
Ssu6g1148 374 PANTHER AGMATINE DEIMINASE 2 373 - -
Ssu6g1148 374 TIGRFAM agmatine_aguA: agmatine deiminase 6 372 IPR017754 GO:0009446|GO:0047632
Ssu6g1148 374 Gene3D - 3 373 - -
Ssu6g1148 374 Pfam Porphyromonas-type peptidyl-arginine deiminase 13 372 IPR007466 GO:0004668|GO:0009446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1148 K10536 - gmx:100811750 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1148 6 18699755 18704706 Ssu6g1148 6 18699755 18704706 ECH