Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1146 ATGCTTAAAAAGAGGAGTCAAGAGGTGGTCAAAAGTATAAGGCGAGGTCATAAAGGATTGTGTGTTATAGCTGGGAATATATCACCCATTGATGTCATCACTCATGTTCCTATCCTCTGTGAAGAGGCTGacattccatatatatatgtccCATCTAAAGAAGACCTTGCAGGTGCAGGAGCAACAAAGAGGCCTACTTGCTGTGTTTTGGTAATGACAAAGCCTGCAAAGGGTGAAATAGAGCAAGGAGAACAAGAGAAACTAAAGTCAGATTATGATCAAGTTGTATCGGATATTACTGAGCTTACAGCTTCACTTTTTTGA 324 0.3827 MLKKRSQEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEEADIPYIYVPSKEDLAGAGATKRPTCCVLVMTKPAKGEIEQGEQEKLKSDYDQVVSDITELTASLF 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1146 107 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 2-LIKE PROTEIN 2 105 - -
Ssu6g1146 107 Gene3D - 1 102 IPR029064 -
Ssu6g1146 107 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 7 73 IPR004038 -
Ssu6g1146 107 PRINTS Ribosomal protein L7A/RS6 family signature 37 47 IPR018492 -
Ssu6g1146 107 PRINTS Ribosomal protein L7A/RS6 family signature 21 34 IPR018492 -
Ssu6g1146 107 PRINTS Ribosomal protein L7A/RS6 family signature 2 16 IPR018492 -
Ssu6g1146 107 PRINTS Ribosomal protein L7A/RS6 family signature 47 61 IPR018492 -
Ssu6g1146 107 SUPERFAMILY L30e-like 7 79 IPR029064 -
Ssu6g1146 107 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1146 Ssu-Chr6 18651571 18652834 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1146 K11129 - gmx:100305515 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1146 6 18651571 18652834 Ssu6g1146 6 18651571 18652834 ECH