Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1142 atgttttcttttatactcATATCTTCTTACACTACAAGAATTCTCGCTATTACAgtaattacaGCGGATCTCCCCCTTCTCCCTTATTTTCGAAACTTCATTCCGGAGCCCTACTGGTCACCAGCAACCAGCGGCCGTCCAACGCTGGTCTGCCGCCGACTTCAGGCTGCCACCCCGCgacacaaacaaacaataaaagagagaTTAGAAAGGCGAATCTGGAATTTGGCGGGAATGGAAGGGAGTGAGGGTGAGGCGGTTTTTGGTGCCCTTAATCTGAACCCGCAACTCTTCTCTAACGAAGTTCTCAACATCGTCGACGATACGCTCGACGAAGCCTTCAATTTCTTCTACCAGGACGCATCGACGAAGCTCAACATCGAAGGCACCCAAAGGTCCCAAGATCTGAAAAAgGCTGTTGATTGCATTCGGCTGAGGGTTCAATCTGTTCTGGACAAACAGCTTTCTGTTTGGGAGAATTACATCCTGCGTCACTGTTTTGATCTTCCCCGAGGTTTTCGTATGCCAAACACGGATGAATCAAATGAGAATGACCTTGATCTGGGTGCTACTTTTGATCCAGATATAGATGCCCAGTTAGATTCATTGAGAGAAAAACTAACCGAGGTGGGGAAGGAGTCTGAAATGCTTAATCAAGAAATTCAAGCGTTAGAAAGAAAGTCTACTGTCAATGTTGGATATATCAATGAAGCAGTACAATTGTATGAGCAAAACTCTATGCATGAGTTGTTTCAGGTTGACAGATCTCTAAATACACCATTGATTCCTATAGAGATTGTGACCACCGCCTCAGAACTTGGAATGAAGATGGGAAAGCTAAACTCCAGCATGATTGAAGAGACTGaccaaatgaaaacaaaaaggatTTACAGCACAGAAATGGATCTATCTGCTATAAATCCTGCTAAAGGCCTCTCAAACATGAAGGTAGACAATCTTGAAGAATTTGCAAGTGTTATGAAGAGTATGTGA 993 0.4129 MFSFILISSYTTRILAITVITADLPLLPYFRNFIPEPYWSPATSGRPTLVCRRLQAATPRHKQTIKERLERRIWNLAGMEGSEGEAVFGALNLNPQLFSNEVLNIVDDTLDEAFNFFYQDASTKLNIEGTQRSQDLKKAVDCIRLRVQSVLDKQLSVWENYILRHCFDLPRGFRMPNTDESNENDLDLGATFDPDIDAQLDSLREKLTEVGKESEMLNQEIQALERKSTVNVGYINEAVQLYEQNSMHELFQVDRSLNTPLIPIEIVTTASELGMKMGKLNSSMIEETDQMKTKRIYSTEMDLSAINPAKGLSNMKVDNLEEFASVMKSM 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1142 330 Pfam Mis12 protein 89 218 IPR008685 GO:0000278|GO:0000775|GO:0005634
Ssu6g1142 330 PANTHER PROTEIN MIS12 HOMOLOG 79 329 IPR008685 GO:0000278|GO:0000775|GO:0005634
Ssu6g1142 330 Coils Coil 200 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1142 Ssu-Chr6 18620104 18624804 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1142 - - gmx:100306256 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1142 6 18620104 18624804 Ssu6g1142 6 18620104 18624804 ECH