Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1139 ATGGTTGCCCTTTCGCTTTCAACTCCCAATCTCTCCACCGCCTTCCTCGCAAAAAAACTGTCTCTTCGTGAACGTACGGTGAACCTTACGACCTTTCGCAACAACTCATTTCGCACTAGATGCGCGGTGGACACGCCCTATGGAGGTAACGTCCAAAAATTCCCTCGAATCAATGTTTGGGATCCTTACCGTCGCCTTGGTATTAACCGTGATGCTTCTGAAGAAGAAATTTGGGGATCGAGAAATTTTCTGTTGCAACAATATGCTGGACATGAGAGGAGTGAAGAATCAGTAGAAGCcgcttttgaaaaaatattgatggCAAGTTTCATACAgaggaagaaaacaaaaattaatttgaaaagcaagttgaaaaagaaagtaGAAGAGTCTCCACCATGGGTCAAGAACTTGCTAAACTTTGTTGAACTTCCACCAACTGAAATTATCCTCAGAAGATTGTTTCTCTTTGGCTTCATGGGTGGCTGGAGTATTATGAATTCTGCTGAAACTGGACCTGCTTTTCAGGTGGCAATCTCTTTGGCTGcttgcatatattttcttaaCGAAAAGACAAAGAGCTTGGCTAGAGCATTCATTATTGGGTTTGGAGCTCTAGTGGCTGGATGGGTCTCTGGTTCAGTGCTGGTACCCAATATTCCATCTATGTTGCTACGCCCAACTTGGACACTTGAGCTCTTAACATCATTAGTAGTTTATGTGTTCTTGTTCATTGCTTGTACTTTTCTCAAGTGA 756 0.3915 MVALSLSTPNLSTAFLAKKLSLRERTVNLTTFRNNSFRTRCAVDTPYGGNVQKFPRINVWDPYRRLGINRDASEEEIWGSRNFLLQQYAGHERSEESVEAAFEKILMASFIQRKKTKINLKSKLKKKVEESPPWVKNLLNFVELPPTEIILRRLFLFGFMGGWSIMNSAETGPAFQVAISLAACIYFLNEKTKSLARAFIIGFGALVAGWVSGSVLVPNIPSMLLRPTWTLELLTSLVVYVFLFIACTFLK 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1139 251 PANTHER PROTEIN CHAPERONE-LIKE PROTEIN OF POR1, CHLOROPLASTIC 1 251 - -
Ssu6g1139 251 PANTHER - 1 251 IPR021788 -
Ssu6g1139 251 Pfam Protein CHAPERONE-LIKE PROTEIN OF POR1-like 70 250 IPR021788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1139 Ssu-Chr6 18595245 18597905 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1139 - - gmx:100500163 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1139 6 18595245 18597905 Ssu6g1139 6 18595245 18597905 ECH