Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1132 ATGGAGTCCGACGAAGACGATTTTGTTTTCTATGGAACGCCGATAGAGCGTGAAGACGATTTAACCAGTCGCAAAAAGAAGGCCATTGCCGAGTCCTCCGGTCACCTTCGAACCCTCCCTGCTTGGAAGCAAGAGGTTAGAGATGAGGAAGGGCGGAGAAGATTCCATGGAGCATTTACAGGAGGTTTTTCCGCTGGTTACTATAATACAGTGGGCTCAAAGGAAGGGTGGGCACCTCAGACATTTAAATCATCCAGGAAGAACAGAGCTGAATTCAAAGAGCAGAACATATTGAATTTTCTAGATGAAGATGAGAAAGCTGAATTGGAAGGTCGGTTTTTGGGGACAACTTCACAGTTTGACACATTTGGTTTCACAGCTGCTGAAATTGCTCGCAAACAAGCTGAGGAGGAACAGAAACAGAGGCCATCCATTATTCCTGGACCTGCTCCTGATGAATTAGTTGTTCCAGCCATCGAGTCTGTTGGGGTAAAACTGCTCTTGAAGATGGGATGGAGTCGTGGTCGCTCAATCAAGGATTCACATTCTGATGCACTGTATGATGCCAGAAGACAAGCTCGTAGAGCTTTCTTAGCATTTTCTTCTGATGATCCAGAAGTGAAAATTACCAAGTCTGAGTCTATCAAGGGtgatattgaaaattttcctgAGCAGCCTGTGAATGATGATCAGTTTTCTAAGGGCACACCGGTTTACATACTCAACCCAAAGCAAGACCTGTATGGATTaggttttgatccttataagCATGCTCCTGAGTTTAGAGAGAAAAAAAGATCACGCTTATCCAGCCAGGTGGGACCTGGGCATAGCAAAAACTTTTCCACTAGAGATGGCCTTTTTGGTTTGAAGTCAGGAAAGGCTGCCCCTGGTTTTGGCATTGGAGCCCTTGAGGAGcttgatgctgaggatgaggaTGTCTATGCCACTGgtTACGAATTTGAAGATGCTTATGTTCAAGAAGTTGAAGAACCTTCAATGTTGAGCTTAGAAAAccagagaaagaaagagcagAAGGACCAGGGTGATCTGCCTGGTTTTAGAGTTGCATCCAATTCTGACTATAAAATGGAAAGATTCGAGGCTCCTCTGATTCCCAAGGATTATGTGCCCCACCATCAATTTTCTGGACCTCTTGAAGTTAACCACAAGAGCTATGAAGTTACTCCACTGGATGTTCCTCCTCCTGAGGATGgcaatttaaaactattaattgaGGGGGTTGCAAATCTGGTAGCTAAATGTGGTAAATTATATGAGGATTTATCTAGAGAAAAGAATCAATCAAATCCATTGTTTAATTTCCTTTCTGGAGGAACTGGCCATGATTATTATGCAAGGAAATTGTGGGAGGCACAACAGAAACGCAATGATCAGACTAGTCAGCAATTGGATGGAAAGATGCCTCTCAGTGTGCAGAGGCTAACAGCTGAGAGCCGAGGCCAGCTCTTAGGGGAAAAACCTCTAGAAAAAAGCTCCCAAGATACATCCTCATCTGTAGCTTCTACAGATATTCATCTCCAATTTAATCTTACTGATACATTTACCAAGTCTGCATCATTTAGTGAGTTAATGAATGTTGAAAAGCCTTTCAAAGATGATCCTGCAAAGCAAGAAAGATTTGAGCAGTTTCTTAAGGAGAAATATAAAGGGGGATTACGCTCTGCAAGTTCTAGTTTAGCTGGTGATATGTCAGAAGCTGCTCGTGCTCAAGAGAGACTAAGTTTTGAGGCTGTAGCTGAGGCAATAGAAAAGGGACGACAGGGCAGGGGAAGCAAGCCTTTAATTCCATCTTCCATGGATTTCATCCCAGGTGGTGTTATGCAGTTTACTTCTGGGGAAGTAGAGCCAAAGAAAGACCTGCAAGCTGAAGATATTTTGAGGAAGAAAATGTACCCCAAGAGGGAAGAGTTTCAATGGCGCCCTTCACCTCTTCTGTGCAAACGTTTTGATCTTATTGATCCTTATATGGGGAAGCCACCGCCTGCTCCACGGATTAGGAGTAAGATGGATTCCTTGATTTTTACATCAGATTCTGTCAAAGGTACCAAAGTGGACGAGCCTGTTACTTCAAAGAAAGACATCTCACCTTTGCAACAATCTACTAATAAAGACATAACCAAAAATATTACCGAAAATGAAACTGAAGGCGACGGGGaagttgaaaatattgaaaGGCCAGTTGACCTATACAAGGCTATTTTCTCCGATGATTCAGATGATGAAGGGGAAGACTCTAGTATTGGGAGAGTGGAGAATCAAGAAAAGAAAGCTGAAGTAGCTAATACAGCATTGAGCCGTTTGATTGCTGGTGATTTTCTGGAATCATTGGGGAAGGAACTAGGAATTGAGGTTCCTCCTGATATGCCTAACCCTACACAAAAGTCCAAGAATATTGCACCTCAGAAAGAAATTGTGAATGAAAATGCAAGAACTGACACCCTGAAGAGCGAAAATAACGGTGTGATGTCCTTGAATCATGATTTGCCATATGATCAGCACATTGCTCATGAGGGTGGACCATCAAAAGGTGACACCATTCATGGAGATATGCTTGAGAGCAGTAATATCAAAACCAAGGGAACCAGTATCATGGACAGTAAACCAGGTAAGTCTAATGGGAAGAATATTGAAGATGACAGGAAAATTAAATCGCCTTTAATCTGCAGCCAAGACCATGGCAGCAGTTCAGAAGAGGAAAGGAGCAGAAAGCGATCTAATAGGGAAAAATATGAAGAGTACAGGAAAGTTAAAACACCTTCAACACACCGCCGAGATTATAGCAGCAGTTCTTCATTGGAAGAGGAAAGGAGCAAAAAACGTTCCAGACATCATCGACGCAAGAGGCATGATGCAGGAAGTGATAGACAAAGTTCAAGGTCAACAGGGAGAAGGAAAGGTTCTTCCCGAGGAAAAAGCAGTGGAAGTGAAAAACACTCAAAACATCACAAGCACAGAAAACATGAACCTCCAAGTAGATCCTCTCGTTATAGCAACGAGAAGGACAATGAACAttccaaaaaagagaaaaggcgGAGGGAATAA 3066 0.4116 MESDEDDFVFYGTPIEREDDLTSRKKKAIAESSGHLRTLPAWKQEVRDEEGRRRFHGAFTGGFSAGYYNTVGSKEGWAPQTFKSSRKNRAEFKEQNILNFLDEDEKAELEGRFLGTTSQFDTFGFTAAEIARKQAEEEQKQRPSIIPGPAPDELVVPAIESVGVKLLLKMGWSRGRSIKDSHSDALYDARRQARRAFLAFSSDDPEVKITKSESIKGDIENFPEQPVNDDQFSKGTPVYILNPKQDLYGLGFDPYKHAPEFREKKRSRLSSQVGPGHSKNFSTRDGLFGLKSGKAAPGFGIGALEELDAEDEDVYATGYEFEDAYVQEVEEPSMLSLENQRKKEQKDQGDLPGFRVASNSDYKMERFEAPLIPKDYVPHHQFSGPLEVNHKSYEVTPLDVPPPEDGNLKLLIEGVANLVAKCGKLYEDLSREKNQSNPLFNFLSGGTGHDYYARKLWEAQQKRNDQTSQQLDGKMPLSVQRLTAESRGQLLGEKPLEKSSQDTSSSVASTDIHLQFNLTDTFTKSASFSELMNVEKPFKDDPAKQERFEQFLKEKYKGGLRSASSSLAGDMSEAARAQERLSFEAVAEAIEKGRQGRGSKPLIPSSMDFIPGGVMQFTSGEVEPKKDLQAEDILRKKMYPKREEFQWRPSPLLCKRFDLIDPYMGKPPPAPRIRSKMDSLIFTSDSVKGTKVDEPVTSKKDISPLQQSTNKDITKNITENETEGDGEVENIERPVDLYKAIFSDDSDDEGEDSSIGRVENQEKKAEVANTALSRLIAGDFLESLGKELGIEVPPDMPNPTQKSKNIAPQKEIVNENARTDTLKSENNGVMSLNHDLPYDQHIAHEGGPSKGDTIHGDMLESSNIKTKGTSIMDSKPGKSNGKNIEDDRKIKSPLICSQDHGSSSEEERSRKRSNREKYEEYRKVKTPSTHRRDYSSSSSLEEERSKKRSRHHRRKRHDAGSDRQSSRSTGRRKGSSRGKSSGSEKHSKHHKHRKHEPPSRSSRYSNEKDNEHSKKEKRRRE 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1132 1021 Gene3D Surp module 372 466 IPR035967 GO:0003723|GO:0006396
Ssu6g1132 1021 MobiDBLite consensus disorder prediction 983 998 - -
Ssu6g1132 1021 SUPERFAMILY Surp module (SWAP domain) 386 461 IPR035967 GO:0003723|GO:0006396
Ssu6g1132 1021 MobiDBLite consensus disorder prediction 859 877 - -
Ssu6g1132 1021 Pfam Surp module 411 458 IPR000061 GO:0003723|GO:0006396
Ssu6g1132 1021 MobiDBLite consensus disorder prediction 335 350 - -
Ssu6g1132 1021 MobiDBLite consensus disorder prediction 999 1021 - -
Ssu6g1132 1021 MobiDBLite consensus disorder prediction 743 763 - -
Ssu6g1132 1021 Pfam Protein of unknown function (DUF1604) 39 119 IPR011666 GO:0006397
Ssu6g1132 1021 MobiDBLite consensus disorder prediction 798 833 - -
Ssu6g1132 1021 MobiDBLite consensus disorder prediction 791 1021 - -
Ssu6g1132 1021 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 1 956 - -
Ssu6g1132 1021 MobiDBLite consensus disorder prediction 901 946 - -
Ssu6g1132 1021 PANTHER BNACNNG56020D PROTEIN 1 956 - -
Ssu6g1132 1021 MobiDBLite consensus disorder prediction 335 355 - -
Ssu6g1132 1021 ProSiteProfiles SURP motif repeat profile. 411 455 IPR000061 GO:0003723|GO:0006396
Ssu6g1132 1021 MobiDBLite consensus disorder prediction 879 894 - -
Ssu6g1132 1021 SMART surpneu2 409 461 IPR000061 GO:0003723|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1132 K13123 - gmx:100796934 1593.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1132 6 18459847 18472925 Ssu6g1132 6 18459847 18472925 ECH