Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1130 ATGGACACAACCTCAACCCCTCAACCCCAAGATTCATCCTCGAAGAGGCACTTCCACTGGACCAACAAGGTCGGAAATGAAGACGGCGAAGTCCCCACCTCAGAAACAATGTCCAAAATCGTAGAGGAAGACACAAACACAAAGGAAGAAGATGACAAGGCTGTTCCACTCCCTGCAGCCACTTCCCAAGCAGCAACAAGGAGGAAGCTTCAGGCCATGGCGATCTCAAGGCTCCGCTCTGTCCTCACCGTGTTTGGCAAGAACCGCTCCAACCTGCCCTTCGGCCTCGGTTCTCGAGTTGTCGGCACCCTCTTCGGCTACCGTCGCGGCCACGTGCATTTCGCCTTCCAGAAGGACCCCACTTCCCAACCCGCGTTCCTCATCGAGCTTGCAACACCCATCAGCGGTTTGGTCCGTGAAATGGCTTCTGGGTTGGTCCGAATTGCGCTCGAATGTGACAAAGAAAAGGAGACAGAGAAGAAGACCGTGAGGCTGCTTCAGGAGTCTGTGTGGAGGACATATTGCAACGGCAAAAAGTGTGGCTTTGCTACGAGAAGAGAATGCGGGGCAAAAGACTGGGACATTCTGAAGGCCGTGGAGCCAATTTCAATGGGTGCAGGCGTTTTGCCGGCGAGTAATAACAGTGATGGAGCTGAAGCAGCAGGGTCTGATGGGGAAGTCATGTACATGAGGGCTAGGTTTGAGAGAATTGTTGGGTCTAGAGACTCTGAGGCTTTCTACATGATGAATCCTGACAGCAATGGAGCACCCGAACTCAGCATTTATTTGCTTAGAGTCTAG 801 0.5281 MDTTSTPQPQDSSSKRHFHWTNKVGNEDGEVPTSETMSKIVEEDTNTKEEDDKAVPLPAATSQAATRRKLQAMAISRLRSVLTVFGKNRSNLPFGLGSRVVGTLFGYRRGHVHFAFQKDPTSQPAFLIELATPISGLVREMASGLVRIALECDKEKETEKKTVRLLQESVWRTYCNGKKCGFATRRECGAKDWDILKAVEPISMGAGVLPASNNSDGAEAAGSDGEVMYMRARFERIVGSRDSEAFYMMNPDSNGAPELSIYLLRV 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1130 266 PANTHER DUF617 FAMILY PROTEIN 1 266 - -
Ssu6g1130 266 MobiDBLite consensus disorder prediction 1 36 - -
Ssu6g1130 266 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 100 266 IPR006460 GO:0010274
Ssu6g1130 266 MobiDBLite consensus disorder prediction 1 15 - -
Ssu6g1130 266 PANTHER PROTEIN MIZU-KUSSEI 1 1 266 IPR006460 GO:0010274
Ssu6g1130 266 Pfam Protein of unknown function, DUF617 100 265 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1130 Ssu-Chr6 18435452 18436252 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1130 - - gmx:100797914 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1130 6 18435452 18436252 Ssu6g1130 6 18435452 18436252 ECH