Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1129 ATGCCGGTTTCAACTCGGTCTCAGATCTTCGTCACCAACAATGTCGAAAACGAGCCAAACCCATCAACAGCGACGAGACTGAGAAACCCACACCATGGCCTCAAGGAGAAGCTCAAAACGCTCACTCTCTTATACGAGCAGCAGAAGCAGGCCTCTGCAGCTCTCAAGAACGCCTCCTTCAGGCCCCAAGAGAAGACCGTCATGCGAGAGAACGCAATGCCCAACACCACAATCACAAGAACCTTCGTCTTACCCCAACCGCCCTCaaacgacgacgacgacgacgcaAAGGAAAACGTCATCATCGGCGCCGACCGAATTGTCGGGTTTTCGTGTCCGAGAAGGCCAACCACCGCCACAACGGCAAATAATGTTTCGGCTTCGTGTTCTGCCACCGTGGCGCGGAAGCTCTCGATGGGGAATGTGGCTGCTCCCAGAGGGAGCGCGCAGGAGTCGGAGAGAGCGGAGGCGGTTTTGGAGAAGCAAGGGAAAGTCGGGAGCAGGATTCTCGTCTTCGTGAGGCTGAGGCCTATGaataagaaggaaaaggaaGCGGGTTCGCGGTGCTGCGTGAGAGTCGTTAATCGCCGTGACGTTTATCTCACGGAGTTTGCCAACGAAAACGATTACCTCAGACTCAATAGGCTTCGCGGACGCCACTTTACCTTCGACGCCGCGTTTCCAGATTCCGCCACTCAGCAAGAAGTTTATTCCACCTCAACCTCGGAGCTTGTGGAAGCAGTTCTGCAAGGGAGGAATGGGTCGGTTTTTTGTTATGGTGCCACGGGAGCTGGGAAGACATACACAATGCTGGGGACGGTGGAGAATCCTGGGGTTATGGTTTTGGCGATTAAGGATCTTTTCAGTAAAATCAGGCAGAGGAGTTGTGACGGAAGCCATGTGGTTCATTTGTCCTATCTTGAGGTTTATAATGAAACTGTTAGGGATTTGCTTTCCCCTGGAAGGCCACTCGTTCTTAGAGAAGATAAACAGGGGATTGTAGCGGCTGGTCTTACACAATATAGAGCTTATTCCACGGATGAAGTGATGGCATTGCTTCAACAAGGAAATCAGAACCGAACCACAGAACCAACTCGTGCAAATGAAACATCTTCGCGTTCCCATGCAATTTTGCAGGTTGTGGTAGAATACCGAGTTAGAGATGCTgcaatgaattttattaatcgAGTGGGTAAGCTCTCATTAATTGATCTTGCAGGGTCAGAAAGAGCTCTTGCCACGGATCAAAGAACACTTAGATCTCTTGAGGGTGCCAATATAAACCGCTCTCTTCTTGCACTAAGCAGCTGTATTAATGCTCTAGTAGAAGGCAAGAAACACATACCATATCGAAACTCAAAACTCACTCAACTTCTCAAGGATTCACTGGGAGGAACTTGTAACACGGTCATGATTGCAAATATAAGCCCAAGTAACCTCTCATTTGGTGAAACTCAGAACACAGTTCATTGGGCTGATAGAGCCAAGGAGATTCGGGCAAAGGTAAGCGATGCAAATGAGGATCAATTGCCAGTGCCCGAGACAGAGACTGACCAGGCCAAGCTGGTACTTGAGCTGCAAAAGGAGAACCGTGAATTAAGAATACAACTAGCACAACATCAACAAAAGTTGTTGACTCTCCAAGCACAATCCTTAGCTTCACATTCCTCCCCAACACCACCTTCAGCTGAACCTCTTTCCACTACTCCGACTTCTGCCCAACCAAATGAAAAACGAAGGACTAGATCCTCTTTCTTGGCTGGAACTTGTTTCACTCCTGAAACCAAGAAGAAGGTTGGAACTTGTTTCACTCCAGAAACCAAGAAGAAGGGAGCTGAACTAGCTATCAAGACACTTCAACGGACTGTAAAAGCACTAGAGGCAGAgatagagaaaatgaagaaagaccATGGCTTACAGCTAAAGCAAAAAGATGATCTTATTCGGGAGCTTTCACAGAAGGTTGGAAAACAAGCATTAACAACTGGGGAAGTGGGGAAGCGAATGGTGACCAGGGCTAGCCTACATCCAAAGGAACCTAACAATAGCGAGATGAAGAGTCCAAGTCAACGTTTTAGATCACCAGCCCCAACTGCCAAGAAACGAAGCTTTTGGGACATAACCACAACTAATAGTCCATCAGTTACTACATTAAATGGGAGAAAAACTAGAAGTCATGTCCTTGCTGAACCTACTGCACCTCCTCCATCCATGCTTCTTCAGCCTGGTTTTGCTCGTCAAAAAGCCAATATTTAA 2256 0.4637 MPVSTRSQIFVTNNVENEPNPSTATRLRNPHHGLKEKLKTLTLLYEQQKQASAALKNASFRPQEKTVMRENAMPNTTITRTFVLPQPPSNDDDDDAKENVIIGADRIVGFSCPRRPTTATTANNVSASCSATVARKLSMGNVAAPRGSAQESERAEAVLEKQGKVGSRILVFVRLRPMNKKEKEAGSRCCVRVVNRRDVYLTEFANENDYLRLNRLRGRHFTFDAAFPDSATQQEVYSTSTSELVEAVLQGRNGSVFCYGATGAGKTYTMLGTVENPGVMVLAIKDLFSKIRQRSCDGSHVVHLSYLEVYNETVRDLLSPGRPLVLREDKQGIVAAGLTQYRAYSTDEVMALLQQGNQNRTTEPTRANETSSRSHAILQVVVEYRVRDAAMNFINRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGTCNTVMIANISPSNLSFGETQNTVHWADRAKEIRAKVSDANEDQLPVPETETDQAKLVLELQKENRELRIQLAQHQQKLLTLQAQSLASHSSPTPPSAEPLSTTPTSAQPNEKRRTRSSFLAGTCFTPETKKKVGTCFTPETKKKGAELAIKTLQRTVKALEAEIEKMKKDHGLQLKQKDDLIRELSQKVGKQALTTGEVGKRMVTRASLHPKEPNNSEMKSPSQRFRSPAPTAKKRSFWDITTTNSPSVTTLNGRKTRSHVLAEPTAPPPSMLLQPGFARQKANI 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1129 751 Coils Coil 523 550 - -
Ssu6g1129 751 PRINTS Kinesin heavy chain signature 251 272 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g1129 751 PRINTS Kinesin heavy chain signature 399 417 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g1129 751 PRINTS Kinesin heavy chain signature 448 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g1129 751 PRINTS Kinesin heavy chain signature 365 382 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g1129 751 Pfam Kinesin motor domain 174 498 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g1129 751 MobiDBLite consensus disorder prediction 673 751 - -
Ssu6g1129 751 PANTHER KINESIN-RELATED 601 744 IPR027640 GO:0003777|GO:0007018
Ssu6g1129 751 PANTHER KINESIN-LIKE PROTEIN 601 744 - -
Ssu6g1129 751 MobiDBLite consensus disorder prediction 703 723 - -
Ssu6g1129 751 ProSitePatterns Kinesin motor domain signature. 398 409 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ssu6g1129 751 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 543 IPR027417 -
Ssu6g1129 751 Gene3D Kinesin motor domain 160 504 IPR036961 -
Ssu6g1129 751 MobiDBLite consensus disorder prediction 676 696 - -
Ssu6g1129 751 ProSiteProfiles Kinesin motor domain profile. 168 498 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g1129 751 MobiDBLite consensus disorder prediction 550 581 - -
Ssu6g1129 751 SMART kinesin_4 166 506 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g1129 751 Coils Coil 609 643 - -
Ssu6g1129 751 PANTHER KINESIN-LIKE PROTEIN 150 598 - -
Ssu6g1129 751 PANTHER KINESIN-RELATED 150 598 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1129 Ssu-Chr6 18424374 18428265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1129 113 545 Miscellaneous Gene Families AT2G21380 34.234 1.62e-59 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1129 K10401 - gmx:100798358 1239.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1129 6 18424374 18428265 Ssu6g1129 6 18424374 18428265 ECH