Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1122 atggaTGTGAGGAACATTGCTGTGGTGGTGGAAGACGTGGATGCGGCTAGAACTGCACTACAATGGGCACTTCACAACATCATTCGCTATGGTGACATAATCACACTGCTCCATGTCTACCCTTTAACAAGATCCAAAAGCAGAAACAAAGCTCGCCTTCTTCGCCTCAGGGGCTTCCAGTTAGCACTTTCCTTCCAAGACATTTGCAACAACTTCTCCAATACAAAGGTTGAGATTGTTGTCACGGAAGAGAACCGAGAAGGAATGAAAATTGTGGCCACGGTACGGGAGATTGGTGCTTCAATGCTAGTGGTTGGACTTCATGATCATAGTTTTCTTTACAGCTTGGCAATGATCCATAACAACATAGCTAACTACTTTAACTGTAGAGTGCTTGCCATCAAGCAGCCTTCTACGTCCCCACTGAGTCCAATGGTAGTCCAAGGCAGTTCAACCAACATGGACTTTTTACAGATCGACATATCTAGATTACAAGTTCCTGATACCCCTCCACCAAAGGTAACCGGATTTGCCCTGACCCGACTGTAA 549 0.4517 MDVRNIAVVVEDVDAARTALQWALHNIIRYGDIITLLHVYPLTRSKSRNKARLLRLRGFQLALSFQDICNNFSNTKVEIVVTEENREGMKIVATVREIGASMLVVGLHDHSFLYSLAMIHNNIANYFNCRVLAIKQPSTSPLSPMVVQGSSTNMDFLQIDISRLQVPDTPPPKVTGFALTRL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1122 182 CDD USP_Like 5 113 - -
Ssu6g1122 182 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 174 - -
Ssu6g1122 182 Pfam Universal stress protein family 4 135 IPR006016 -
Ssu6g1122 182 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 174 - -
Ssu6g1122 182 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 136 - -
Ssu6g1122 182 Gene3D HUPs 2 137 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1122 Ssu-Chr6 18326307 18346414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1122 - - gmx:100801011 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1122 6 18326307 18346414 Ssu6g1122 6 18326307 18346414 ECH