Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1119 ATGGCGGACCACAACCCAAGCCCGGCCCAAGCCCAGAGAACCGCGGCACCATCCTCTCCCTCAGCCGCGTTTCTCCGAAAACTCCAAGAGCGGGCCCCCAACTCAACCCAGCTGGCAGGAATCCTGACCCTTCTGGTGACCGCCTCCGCCTTGGTCCTCCTCACGGGCCTAACCGTCGCGGGGGCCGTTCTGGGCCTGTTATTTTTCCTGCCTTTGATCATCGTGTCGAGCCCAGTGTGGGTCCCTGCCGGCACCCTTCTCTTCGTGGTCACCGCAGGGTTCTTGTCCGTGTGCGCATTCGGCGTGGCCCTCGTGGCGGCGTTGTCCTGGATGTACCGTTACTTTAGGGGGCTCCACCCGCCCGGTTCGGACCGGGTCGACTACGCTCGGAGCCGGATTTACGACACCGCCAGCCACGTCAAAGACTATGCCAGAGAATACGGTGGGTATTTGCAGAGTAAGGTCAAGGATGCCGCCCCTGGCGCTTGA 489 0.6278 MADHNPSPAQAQRTAAPSSPSAAFLRKLQERAPNSTQLAGILTLLVTASALVLLTGLTVAGAVLGLLFFLPLIIVSSPVWVPAGTLLFVVTAGFLSVCAFGVALVAALSWMYRYFRGLHPPGSDRVDYARSRIYDTASHVKDYAREYGGYLQSKVKDAAPGA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1119 162 PANTHER F27J15.22 2 162 - -
Ssu6g1119 162 PANTHER OLEOSIN 2 162 IPR000136 GO:0012511|GO:0016021
Ssu6g1119 162 Pfam Oleosin 37 148 IPR000136 GO:0012511|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1119 Ssu-Chr6 18304572 18305060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1119 2 162 Lipid Metabolism Gene Families AT3G18570 52.795 2.31e-52 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1119 - - gmx:100809872 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1119 6 18304572 18305060 Ssu6g1119 6 18304572 18305060 ECH