Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0454 ATGACTAGTGGTAGTTGTATTGGAATCTCTACCATGAAGCCTTGTTGTAGAATCCTAAGTAAGTATAAAAATCCATTGATTTTTGGGTTTTCTCCATCCAAGTTCAGTGATTCAACGATTATGGGCATGTTGTCCAGATCAGGTCATCACAATTCAACCCATCGGCATAGATACAATACCTGTAATACTCAGATTGTAGGGTACATACATGTGATCAAACCGAATCGGAGAGATTTTAGTGTTTCCGGCTCGAATTGGGCTCCTTCTAGGAAATTTAGCACTAGTTTTTGTGTCAATATTGGTAGTTTTAGGCCTAGGGTTGTGTCCTTGATACCGCATGTAGCGTCGGATTTTAGGAATCACTCTACATCGGTTGATTCTCATGCTCACGACACGAGCTTTGAGAAGATTTACATTCAAAGCGGCTTGAATGCGAAGCCATTGGTGATTGAAAGAATTGAGACTGATCAAGGTAAATTGGAGGAGGTCTCTGAAGAAAGATGTGACAAGTCAAATGTAAATGTAGATAATTTGAAGGATTTGAGTGAGAATAAGGTTCAGAGGGAGGTGTCTGAGGTAGAAAAGGAAGCTTGGAAGTTGCTTCAGGATGCTGTTGTCACTTACTGTGGGAATCCGGTTGGGACTGTTGCAGCTAATGACACTGCTGACAAACAGCCACTGAATTATGATCAAGTCTTTATCCGTGATTTTGTTCCATCAGCGCTTGCCTTTTTACTCAATGGTGAAGGGGAAATTGTCAAGAATTTTCTACTTCACACGTTGCAATTGCAGAGTTGGGAGAAGACTGTTGACTGCTACAGCCCAGGGCAAGGGTTGATGCCAGCAAGCTTCAAGGTTAGAACTGTGCCTCTTGACGGAAGCAATGAAGCATTTGAGGAAGTTTTGGATCCTGATTTTGGTGAATCAGCTATCGGTCGTGTTGCGCCTGTTGATTCAGgtaagttatttattgttgtGGAAGGTAAAGACATTTTTCTATTACGTGAAATGTTATCTACACTGTCATTAATATGTCATCATCCTCTTTTCCTGATATTTTCTTACTGTATTTttgctttttcaaaatttttctttgcctAA 1101 0.3933 MTSGSCIGISTMKPCCRILSKYKNPLIFGFSPSKFSDSTIMGMLSRSGHHNSTHRHRYNTCNTQIVGYIHVIKPNRRDFSVSGSNWAPSRKFSTSFCVNIGSFRPRVVSLIPHVASDFRNHSTSVDSHAHDTSFEKIYIQSGLNAKPLVIERIETDQGKLEEVSEERCDKSNVNVDNLKDLSENKVQREVSEVEKEAWKLLQDAVVTYCGNPVGTVAANDTADKQPLNYDQVFIRDFVPSALAFLLNGEGEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGSNEAFEEVLDPDFGESAIGRVAPVDSGKLFIVVEGKDIFLLREMLSTLSLICHHPLFLIFSYCIFAFSKFFFA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0454 366 PANTHER ALKALINE/NEUTRAL INVERTASE C, MITOCHONDRIAL 5 326 - -
Ssu6g0454 366 Pfam Alkaline and neutral invertase 197 325 IPR024746 GO:0033926
Ssu6g0454 366 PANTHER - 5 326 IPR024746 GO:0033926
Ssu6g0454 366 SUPERFAMILY Six-hairpin glycosidases 197 324 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0454 Ssu-Chr6 7062985 7064779 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0454 - - gmx:100791877 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0454 6 7062985 7064779 Ssu6g0454 6 7062985 7064779 ECH