Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0439 ATGGATCATAGAAGTGCCAAGGATGAGGATGCTGAAGTTGATCTTGAAAGTGGGTTGGCAGTGACTGGAGATGACTCAAAGAATGTGTCTGCACCAGGTAACACAAAACAAGGGAAGATATTATTTACTAAGATTTCTTATGCTGGAGATTGTATAAAAGGTGTAGATAGGTATAGTGGATGCGGCAACGAGTCAAATTTAACTGTAGTTTCAATGGACATGGTGAAAGTGACAAACAAGTTGTACTCAGTAGAATGTGCAGAGAATAATACCCCACCAGTGAAGGAGAAACGCAAAAAGTCCAGTAATAAGaaggctcccaaacctccgagACCTCCGCGAGCTCCATCATTGGATGCAGCGGACCATAAGCTAATCAGGGAGATCAATGAACTTGCCATGTTAAAGCGTGCGAGGATAGAACGCGTGAAAGCCTTGAAGAGGATGAAAGCTGCTAAAGCATCATCCTCTTCCAGTAGCAGCATGTTTGCTATGGTTTTCACTGTTGTCTTCTGTATTGTGATATTACTCCAAGGCATGTCATCTGGAAAAAGTTCAGTGGCAACTTTCCAGGGATCTCCTGTACCAGCAGGAGTAACAGAGGGTGGTCTGATTGATGTTCAACACCAACTCAATCCATCTTCAAGTGACCCAAATGCAGCCGGTTTAGAGTCTCGCAAAATTGTGCAGCAGGTCATTGGTTCAGATTTGCCTGCAAAACTGAGAAGAGATGCAGGTTGA 741 0.4224 MDHRSAKDEDAEVDLESGLAVTGDDSKNVSAPGNTKQGKILFTKISYAGDCIKGVDRYSGCGNESNLTVVSMDMVKVTNKLYSVECAENNTPPVKEKRKKSSNKKAPKPPRPPRAPSLDAADHKLIREINELAMLKRARIERVKALKRMKAAKASSSSSSSMFAMVFTVVFCIVILLQGMSSGKSSVATFQGSPVPAGVTEGGLIDVQHQLNPSSSDPNAAGLESRKIVQQVIGSDLPAKLRRDAG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0439 246 PANTHER OS01G0299500 PROTEIN 1 244 - -
Ssu6g0439 246 MobiDBLite consensus disorder prediction 89 119 - -
Ssu6g0439 246 MobiDBLite consensus disorder prediction 1 35 - -
Ssu6g0439 246 PANTHER PROTEIN, PUTATIVE-RELATED 1 244 - -
Ssu6g0439 246 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0439 Ssu-Chr6 6839429 6841526 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0439 - - gmx:102667557 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0439 6 6839429 6841526 Ssu6g0439 6 6839429 6841526 ECH
Ssu6g0439 6 6839429 6841526 Ssu7g1925 7 38550200 38550601 ECH
Ssu6g0439 6 6839429 6841526 Ssu1g1203 1 26621588 26623245 PCT