Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0426 ATGACGCCTCGTTCATTCCTTCTCGCCCTGCTGAGTCTCCTCTTGACTCAGTCCGAGTCGGCACCTCAAGCCTTCAGGAGAGATCCCGGTCACCCTCAGTGGCACCACGGAGCCTTCCACGACGTCCGCGATGGCGTCCGATCCGACGTTCGCCGCATGCTTCATTCTCGCGCCGAGGTTCCGTTTCAAGTTCCGCTGGAAGTGAATGTGGTTCTGATTGGTTTTGGTGGAGACGGAGGCTATAGATACAAAATCGATGCGCAGCGATTGGAACAGTTTCTCAAAACTAGCTTTCCAGTTCACAGACCTTCGTGTCTGGAGACTGGGGAGCTGCTTGATATTGAGCACCACATGGTCTATACTACATTTCCTGCTGGACAACCCGAACTGATAGCACTTGAGAAAGCACTGAAAGAGGCAATGGTTCCTGCAGGAAAAGCTAGAGAGACTGAATTTGGAAGGGAGGTACCTTTGTTTGAAGTTGAGGCAACAGCTGTGGAGCCAGTATTTCAAAGGCTGTACTCCTACATATTTGACATGGATAGTGTGGGATCTTCTGTCACAGAGATGGATAAACCAGTGCCAAGTGcaatatttattgtaaacttTGACAAGgTGAGAGTAGATCCTAGAAATAAGGAAATCGATCTTGACAGTTTAATGTACGGCAAAATTCCTGACCTAACTGAGGAAGATATGAAAAAACAAGAAGGAGATTACATCTATCGTTATCGTTACAATGGTGGGGGAGCAACTCAAGTTTGGCTAAGCTCTGGCAGatttGTGGTGATTGACCTTTCAGCAGGGCCATGCACTTATGGTAAGATTGAAGCTGAAGAGGGAAGTGTCTGTTCTAGAACCCTGCCAAGATTACGAAATGTGATTCATCCTAGTAGTTCAAGCATTACTTTTCATCAATCGAGCAATGATATTTTTCTTGGACAGCTTGCTTCTTTGGTATCAACCACAGTGGAACATGTTATTGCACCTGATGTGAGGTTTGAAACGGTTGATCTTACCTCAAGACTGCTTATACCAATAATTGTCTTGCAAAATCATAATCGATACAACATTATGGAAAAGGGCCATAATTACAGTATTAATGTAGAAGAAATTGAGGCAGAGGTGAAAAGTATGCTTCATGATGGGCAAGAACTAGTAATTATTGCGGGTGCACATTCATTACATCGCCATGAGAAGCTGGCAATTGCAGTTTCAAAAGCTATGCGTGGACATTCCCTGCAGGAAACCAAGAATGATGGTCGTTTCCATGTTCATACCCAGACATATCTGGATGGTGCTATTTTAAAAGAGGAGATGGAACATTCTGCTGACGTGCTTGCTGCTGGATTGCTTGAAGTGGCTGACCCATCTCTTTCAAGTAAATATTTCCTCCGCCAGAATTGGATGGATGAATCTGAAGGGTCAACTGATTCTATTCTTAAGCATAAGCCTGTCTGGGCTTCATATAACTCAAAACATGGCAagcaaaggagaaagaaaataaagaaacaaggGGATCTACAACCAACTTATGGAACTAGAGTAATTCCTGTCTTTGTGCTATCACTGGCGGATGTGGATCCAAACCTTATGATGGAAGATGAAAGTATGGTATGGACAAGCAATGATGTTGTTATTGTGCTTGAGCATCAAAATGAAAAGATTCCTTTAAGTTATGTTTCAGAAACACAGAGAAGGCATGCTCTTCCATCTCAGGCACAACGACATATATTGGCTGGTCTTGCCTCAGTTGTAGGTGGTTTAAGTGCGCCATATGAGAAGGCTTCTCATGTACATGAAAGGCCTGTTGTGAATTGGCTTTGGGCAGCTGGTTGTCATCCATTTGGACCATTCTCTAATACATCTCACATCAGTCAAATGCTCCGTGATGTTGCTTTGAGGAACTCAATATATGCACGTGTGGATTCTGTACTTCATAAAATTCGTGACACGTCAGAGACTGTCCAAGCTTTTGCAGCAGAGTATCTGAAAACTCCACTTGGTGAGCCAGtaaagggaaagaaagaaaagtcaaACACTGAACTGTGGTTGGAGAAGTTCTACAAGAAAACTACTAATTTGCCGGAACCCTTCCCACATGAATTAGTTGACCGCTTAGAAAAATATCTAGATGGCCTTGAGGAGCTGCTTGTTGATATGTCTTCACTATTATATGATCATCAGTTACAAGATGCCTACTTGAACAGTTCAGATATTCTGCAGAGCACCATGTTCACCCAACAATATGTTGACCATGTCTTGGCCACCGAGAGGGATAATATGAGATGCTGCAAAATTGAGTACAAATACCCCGTGCACTCTTCGCAAACTTATATCTATGGGGGAATACTTTTTGCTGGGTTCGTTGTGTACTTTGTTGTAATTTTCTTCTCATCTCCGGTGCGCTGA 2412 0.4237 MTPRSFLLALLSLLLTQSESAPQAFRRDPGHPQWHHGAFHDVRDGVRSDVRRMLHSRAEVPFQVPLEVNVVLIGFGGDGGYRYKIDAQRLEQFLKTSFPVHRPSCLETGELLDIEHHMVYTTFPAGQPELIALEKALKEAMVPAGKARETEFGREVPLFEVEATAVEPVFQRLYSYIFDMDSVGSSVTEMDKPVPSAIFIVNFDKVRVDPRNKEIDLDSLMYGKIPDLTEEDMKKQEGDYIYRYRYNGGGATQVWLSSGRFVVIDLSAGPCTYGKIEAEEGSVCSRTLPRLRNVIHPSSSSITFHQSSNDIFLGQLASLVSTTVEHVIAPDVRFETVDLTSRLLIPIIVLQNHNRYNIMEKGHNYSINVEEIEAEVKSMLHDGQELVIIAGAHSLHRHEKLAIAVSKAMRGHSLQETKNDGRFHVHTQTYLDGAILKEEMEHSADVLAAGLLEVADPSLSSKYFLRQNWMDESEGSTDSILKHKPVWASYNSKHGKQRRKKIKKQGDLQPTYGTRVIPVFVLSLADVDPNLMMEDESMVWTSNDVVIVLEHQNEKIPLSYVSETQRRHALPSQAQRHILAGLASVVGGLSAPYEKASHVHERPVVNWLWAAGCHPFGPFSNTSHISQMLRDVALRNSIYARVDSVLHKIRDTSETVQAFAAEYLKTPLGEPVKGKKEKSNTELWLEKFYKKTTNLPEPFPHELVDRLEKYLDGLEELLVDMSSLLYDHQLQDAYLNSSDILQSTMFTQQYVDHVLATERDNMRCCKIEYKYPVHSSQTYIYGGILFAGFVVYFVVIFFSSPVR 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0426 803 PANTHER TRANSMEMBRANE PROTEIN-RELATED 7 801 - -
Ssu6g0426 803 PANTHER BNAC01G21930D PROTEIN 7 801 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0426 - - gmx:100790294 1503.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0426 6 6626195 6632906 Ssu6g0426 6 6626195 6632906 ECH