Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0421 ATGGATCGGCAATCACCGGAGAAACTGATACTCGTGAACCGCGAGCCAAACGGCGTCGCGGTGGTGACGATTAATCGTCCCGGTTCCCTCAATTCGCTGACCCGGCCCATGATGGTGGACCTGGCCCAGGCTTTCAAGAGACTGGGCCGGGACGAGTCGGTGCGGGCGATCATAATAACCGGGTCGGGCCGGTCATTCTGTTCGGGCGTGGATCTTTCGGCGGCAGAGGACGTCTTCAAAGGCGATGTGAAGGACCCGGAGAGCGACCCGGTGGCGCAATTGGAGCGTTGCCGCAAGCCAATAATCGGAGCGATTAGAGGATTCGCCGTCACCGCTGGCTTCGAAATTGCCCTCGCCTGTGACATCTTGGTTGCTGCCAAGGGATCTAAGTTCATGGACACTCATGCTAGGTTTGGGATATTTCCTTCGTGGGGTTTGTCTCAGAAGCTTTCGCGCATCGTAGGGGCCAACAAAGCCCGCGAGGTATCTCTCGCGGCCACGCCTTTGACTGCAGAGGTAGCCGAAAGATTGGGTTTCGTGAACCATGTCGTTGAGGAGGGTGAAGTGTTGAAGAAAAGCAGGGAAATTGCGGATGCCATTGTGAAAAATAACCAAGACTTGGTGTTGAGGTACAAGGCGGTTATCAATGATGGCCTCAAGCTGGATCTTGGCCGCGCACTTTCCCTTGAAAAGGAGAGAGCTCATGATTATTACAATGGAATGACGAAGGAGCAATTCAGGAAGATGCAGGAATTCATAGCTGGTCGAAGTTCCAAGAAACAGTCCAAATTGTAG 795 0.5371 MDRQSPEKLILVNREPNGVAVVTINRPGSLNSLTRPMMVDLAQAFKRLGRDESVRAIIITGSGRSFCSGVDLSAAEDVFKGDVKDPESDPVAQLERCRKPIIGAIRGFAVTAGFEIALACDILVAAKGSKFMDTHARFGIFPSWGLSQKLSRIVGANKAREVSLAATPLTAEVAERLGFVNHVVEEGEVLKKSREIADAIVKNNQDLVLRYKAVINDGLKLDLGRALSLEKERAHDYYNGMTKEQFRKMQEFIAGRSSKKQSKL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0421 264 CDD crotonase-like 10 200 - -
Ssu6g0421 264 SUPERFAMILY ClpP/crotonase 8 261 IPR029045 -
Ssu6g0421 264 Pfam Enoyl-CoA hydratase/isomerase 15 240 IPR001753 GO:0003824
Ssu6g0421 264 PANTHER ENOYL-COA HYDRATASE 5 261 - -
Ssu6g0421 264 Gene3D - 2 238 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0421 18 216 Acyl Lipid Metabolism Gene Families AT1G60550 33.971 2.34e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0421 K01692 - gmx:100170725 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0421 6 6532505 6534896 Ssu6g0421 6 6532505 6534896 ECH