Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0409 ATGAACTACTACTGCCTCCTGTTCTTCTTCTGCTTCACAACCCCCCTCGTATTTAGCGATGTGGAAATGCATTCAGCAGGTCTTTCAGCTCAGACCCTGCATCCTTTCCACGAAGACAAAAACGGGTCCATAACAGTGTCAGTGAAAACAGAACAAGCACACTCTACGTCTGGAAAAGTTTTATTGCATgGCTCTTGCACAGAAAGAGACATAAGCATCTCGCAATGTATCGAGTCTGCAACTGGGATCCCGCAGTACATTGTGGAAATTGTTAATACCTGTGTTTCTGAATGTGCTCCACACGACATTCACCTCCACTGTGGCTGGTTTGCTTCTGCTAGAATAATCAACCCCAAAGTGTTCAAGAGGCTCTCctatgatgattgtttggtgAATGGAGGGAAACCTTTAGCCTCTAGTCAGATCATCAGATTCACTTATTCCAATTCCTTCTTGTATCCTCTTGCATTCAAGTCTGCCAAGTTTTGCTAA 492 0.4248 MNYYCLLFFFCFTTPLVFSDVEMHSAGLSAQTLHPFHEDKNGSITVSVKTEQAHSTSGKVLLHGSCTERDISISQCIESATGIPQYIVEIVNTCVSECAPHDIHLHCGWFASARIINPKVFKRLSYDDCLVNGGKPLASSQIIRFTYSNSFLYPLAFKSAKFC 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0409 163 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE 25 163 - -
Ssu6g0409 163 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 25 163 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0409 Ssu-Chr6 6409885 6410547 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0409 - - aprc:113852241 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0409 6 6409885 6410547 Ssu6g0409 6 6409885 6410547 ECH