Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0406 ATGGAGCGTAGCGATCATGGCTCCAACACAGAGGGAGATTCCGTCATGGACGTAGACCATTGCTCTGAAGATCAAgaaaaggaggaggaagaagaagatccTTTCCTCAAATTCGCGGATTACGCAAGATCCGAGCTATTATCACTGGAAGGCGATCCAAACGGAGACGACGAGGGTTCCGCTGGACTTGGATGGAGTTGGATCGTGTCCCGTATTCTCAAGACTTGCATTGCTTATTCAAGCGGCGTCACTCCCGCGATCTTGCTCTCTGAACTCTCTCAGgCATGGAGTGAGCAACGCAGGGTTGGGGCTCCAAAGAAGAGGCTCGAATTAACTGACCACCTCAAGAAGAATCATCGGAGGACAAAGCCTCCGAACACCGTTACCATTGATTCCATATACGAGAAGAATTTCCTGTCCTTGAACAGTGTTCTAGAAGCTGTTATTGTCGATGCATTTGTGCTCCCAGGCACAAACATCCACATGCTTACATTAGGGGATTATTGGAGCTCCAATGTCATTGATCTCTATCTACACCGCAGATTCTATGACTTGGCAGGCCTGCAGAATGGAATTCTGAAGCGAGGGAGGGAGATTTTCCTCACTGGTTGCTACCTCCGAACCGCCACTGTCGGTACTGGACATCCACGTCTTTTGCCAACAGAGTATCTTGTGATTCTATTGGATGAGAATCAGGATGATGATGCAATGCTACTAGGAGCTCACTTTTGTTCAGActctttctcttcaatttctCTTGATGCGGTGAACGGCGGGGTTTCGTATTCACTTTATGCCCGAATTGAAAACATTGAATCTGCGGAAATTCAAGGGAGGTTTGGaatcttaaaaagaaaacagattACTCTTGTTGATGGTGATGGGGTCAAGTTAAAGTTTTTCTTGTGGGGTGAGCAGACTCTCCTTGCCAATCTCTTCAGAGTGGGAAGCATGCTTGCACTGGACAAACCATACGTTGCAAGTTCAGTGGACTGTGATATTGAGACAAGTGAAGGCTTATGTCTTGAATACGGAAGTGAAACACAATTATATTTGGTGCCTTATATTCAACATGAAGAACAGGTGTGCGTAACATTGACTCCAAATCGCCGTCATGGTTCACGGCCCTTGGGTTCGTATAATCCCAGTCAAGATCTCAAGTTTTCTCAAGTGAGCTTGCCCCGTGATTCTCAGGGGACCATTGATTTCAGTAATTATCCTTTTCGGTCATTCGTGGTCGACCTTCGTAACAAGATGACTGGCATAAGTCTCTATGGTGTTGTTACAGATATTATCAAAGAAGATAATGACCAAGAAACTGTTTTCTCTTTAAGAATCGCGGATACTAGCGGAGAAATTTGGACAAAGCTTCATTTTACCAGATTTTGGTCATTGGGAAGAGTGAGTCTCGGTCACACTGTATTCATATCTGGCTTGACATGCACGATGTCGAAACAAAAGCGTCTGGAAGTATTATGGTTTGAGAATGGTATTGGGGCTTCTTTCATCAATCTCAGTTGCTTACCAGCATTGATCAACTCATCTTGCCTTCATAAGCTATCGCAACTCTCTGATATTTCTGACCAGATTAACTATGCGCAAGTATGTCGAGTCTGGCTTGATCCATCTGAGTATTATTACGTTAATACAAGATTTTCACATTCTCTATGTGGTCATTTTGTCAACAAGATGTCTGATAGATTGGTGGAATGCAGCTTTTGTCGTACAATTTCTGATGCTAGTGTAGTACGTACTTTCCATCTGAAAATTACTCTTGCGGACAAGGGTACGAGTACAAAAGTTTTAGCATGGTGTACAGGTCAAACTGCAATGGATTTGTTGCAGATATCTCCCGATGAGTTTTATGAACTTCCCGAGGAAGAGCAAGTAATGTATCCTTCGTCGTTAGAAAATGAGAGGTTTATGGTTGCATTGGTAAATTGTACGCGCGATGGTTGTATGATAGATGGCCTCTCGCCAGACAATTCAATTTCGTGGGAAATCACCCGTGCATACAAGTGTGAATAG 2028 0.4265 MERSDHGSNTEGDSVMDVDHCSEDQEKEEEEEDPFLKFADYARSELLSLEGDPNGDDEGSAGLGWSWIVSRILKTCIAYSSGVTPAILLSELSQAWSEQRRVGAPKKRLELTDHLKKNHRRTKPPNTVTIDSIYEKNFLSLNSVLEAVIVDAFVLPGTNIHMLTLGDYWSSNVIDLYLHRRFYDLAGLQNGILKRGREIFLTGCYLRTATVGTGHPRLLPTEYLVILLDENQDDDAMLLGAHFCSDSFSSISLDAVNGGVSYSLYARIENIESAEIQGRFGILKRKQITLVDGDGVKLKFFLWGEQTLLANLFRVGSMLALDKPYVASSVDCDIETSEGLCLEYGSETQLYLVPYIQHEEQVCVTLTPNRRHGSRPLGSYNPSQDLKFSQVSLPRDSQGTIDFSNYPFRSFVVDLRNKMTGISLYGVVTDIIKEDNDQETVFSLRIADTSGEIWTKLHFTRFWSLGRVSLGHTVFISGLTCTMSKQKRLEVLWFENGIGASFINLSCLPALINSSCLHKLSQLSDISDQINYAQVCRVWLDPSEYYYVNTRFSHSLCGHFVNKMSDRLVECSFCRTISDASVVRTFHLKITLADKGTSTKVLAWCTGQTAMDLLQISPDEFYELPEEEQVMYPSSLENERFMVALVNCTRDGCMIDGLSPDNSISWEITRAYKCE 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0406 675 Pfam Cell division control protein 24, OB domain 1 35 159 IPR035201 -
Ssu6g0406 675 MobiDBLite consensus disorder prediction 1 22 - -
Ssu6g0406 675 Pfam Cell division control protein 24, OB domain 3 414 636 IPR035203 -
Ssu6g0406 675 PANTHER NUCLEIC ACID-BINDING PROTEINS SUPERFAMILY 34 668 - -
Ssu6g0406 675 MobiDBLite consensus disorder prediction 1 36 - -
Ssu6g0406 675 Pfam Cell division control protein 24, OB domain 2 164 293 IPR035200 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0406 - - gmx:100807658 1189.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0406 6 6355550 6364712 Ssu6g0406 6 6355550 6364712 ECH