Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0404 ATGGACCATAACCCTGTTTCAGCCATCACACAAGCGAATAAAGATCTTGTTTCATCAATTAAAGAGAAGCTTGAAGCTGTTTCATCTTTTAAATCTATCTTCAGAGTCCCCAAGAAACTTCTAGAAGCAAATGAGAGGATGTACATCCCTGGCACAGTTTCAATTGGTCCTCTCCATCACGGTAGGGAGCCTCTAAAATATATGGAAGATCGCAAGTGGCATTATCTGTTCACACTGCTGAGTCGACAACCAAATCCGCTGGAATCAAGCTTGCATGAATGTGTGAATGCACTAAGCAACTTAGAGAAGCCAGCACGAAATTTCTATGCAGAAGAACTCAATTATCTCACAAGCAATCAATTTATGGAAATGATGTTAGTTGATGGCTGTTTCATCATTGAGCTTTTCTTGAAATATGCTCTAAAGGGTATAAGACGCCGTGGGGACCCCATATTTGCCACGCCGGGTTACTCAATAGGGTCAGGTGTGACCTTATCTTGTTAG 504 0.4167 MDHNPVSAITQANKDLVSSIKEKLEAVSSFKSIFRVPKKLLEANERMYIPGTVSIGPLHHGREPLKYMEDRKWHYLFTLLSRQPNPLESSLHECVNALSNLEKPARNFYAEELNYLTSNQFMEMMLVDGCFIIELFLKYALKGIRRRGDPIFATPGYSIGSGVTLSC 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0404 167 PANTHER - 2 157 - -
Ssu6g0404 167 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 2 157 IPR004158 -
Ssu6g0404 167 Pfam Plant protein of unknown function 33 143 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0404 Ssu-Chr6 6341600 6342103 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0404 - - gmx:102668971 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0404 6 6341600 6342103 Ssu6g0404 6 6341600 6342103 ECH