Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0392 ATGTCAAGTAAGAAGGAAGAGAAATCTCAGGCTGCAGCTGAAAGAATCAAGGCTGCAGCCTTGAGTGCTGCGAAAGGCCTTAGTCGTGCCCAGGCTGAAAGGGCAGCAACTGCGGCTGCCCGAAATGTCAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAAAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAGAAAGCTGTTAAATTGGGTGAAAGAAAAGACATTAAGCCTGCAATGTCGGCTGCAGGTGGCGTGGCACAGTGCCAGAAGTGTTTCCAAAGTGGCCACTGGACATATGAATGCAAGAACGAACGGGTTTACATTTCAAGACCATCCCGGACCCAGCAACTGAAAAACCCTAAATTGAGGGTGAATGTGGCTGTGACTTATGATTTGGATGATAATATTCCTGATGCTAAGGAGGAAAAGGCAAAAAAGAGTTCCAAGAAAACGAAAAGGAAGCATCGGTCTGACTCCAATTCTGGTAGTGATAGTGAGGATTCTGTTTTTGAGACTGATAGTGGCAGCGGGTCATCATCTGTTACAGGATCAGATTCTTCTTCTGAAAGTAGTTCAGGTTACAGTTCGTCATCTGATTCAGAGGAAGAACGAAGACGTAGGAGGAAGAAGAAGCAGAAGAGAGGAAGACGCAGGAGGTACAGTACATCATCAGAATCATCTGATTCATATTCTGCTTCAGACTCTGATTCTGATGATAAAAGCAGCCGGAGAAAGAGGAGGCATAATCGAAGACGCTGA 783 0.4572 MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVKLGERKDIKPAMSAAGGVAQCQKCFQSGHWTYECKNERVYISRPSRTQQLKNPKLRVNVAVTYDLDDNIPDAKEEKAKKSSKKTKRKHRSDSNSGSDSEDSVFETDSGSGSSSVTGSDSSSESSSGYSSSSDSEEERRRRRKKKQKRGRRRRYSTSSESSDSYSASDSDSDDKSSRRKRRHNRRR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0392 260 MobiDBLite consensus disorder prediction 30 61 - -
Ssu6g0392 260 MobiDBLite consensus disorder prediction 145 260 - -
Ssu6g0392 260 Pfam Zinc knuckle 91 128 - -
Ssu6g0392 260 PANTHER ZCCHC10 PROTEIN 1 251 IPR039715 -
Ssu6g0392 260 MobiDBLite consensus disorder prediction 171 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0392 Ssu-Chr6 6259646 6260428 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0392 - - gmx:100807084 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0392 6 6259646 6260428 Ssu6g0392 6 6259646 6260428 ECH