Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0384 ATGGTGGGAGCACGGGACATAGACGAGTTGCCAAAGAACGCGGCCAACTACACAGCGTTAACGCCGTTGTGGTTTCTAGAGAGAGCAGCTCAGGTGCACCCCACCAGAAAGTCCCTAATCCACGGATCTCGTCACTACACGTGGCAACAGACTTATCACCGTTGCCGTCGATTCGCTTCCGCTCTTTCTAACCATTCCATCGGTCTCGGAAACACTGTAGCTGTTATAGCACCCAATGTTCCAGCACTCTATGAAGCTCATTTTGGGATTCCAATGGCAGGGGCTGTGTTGAACCCTGTTAATATTAGGCTAAATGCATCCACAGTAGCTTTCCTGCTTGGTCATTGCTCAGCTGCAGCTGTAATAGTCGATCAAGAGTTCTTTTCTTTGGCAGAAGAAGCTTTGAGAATATGGTCTGAGAAAGCCAAAACCTTCAGCCCTCCACTTTTAATAGTCGTTGGTGATGAAAATTGCGACCCTGAGTCACTTAGATATGCTCTGGGTAAAGGAGCGATTGAATATGAGGATTTTCTTCAAAGTGGTGACCCTGAATATGCATGGAAACCCCCAGAGGATGAGTGGCAGAGCATTGCTTTGGGTTACACATCTGGTACCACTGCTAGTCCCAAGGGTGTGGTATTACATCACCGTGGAGCCTATCTCATGTCTCTGAGTGGAGCTCTTATTTGGGGAATGACTGAAGGTGCTGTGTATCTTTGGACACTGCCCATGTTTCATTGCAATGGTTGGTGTTACAGTTGGACACTTGCAGCTCTGTGTGGTACCAACATATGCCTTCGCCAGGTAACAGCGAAGGCAGTATATGAAGCCATTGCCAACTATAAAGTGACTCATTTTTGTGCAGCACCAGTGGTTCTTAACACAATAATCAATGCCCCACCTGAGGAAACTATACTTCCTCTACCCCATGTTGTGCATGTGAATACAGCTGGGGCTGCTCCTCCACCAGCTGTTCTTGCCGGCATGTCTGAACGAGGATTTCGTGTCACACACACTTATGGTCTCTCAGAAACCTATGGCCCCTCCGTATATTGTGCCTGGAAACCAGAATGGGAATCACTTCCTCCTGAATCCCAAGCTCGGCTCAATGCAAGACAAGGGGTTCGTTACATTGGCTTGGAAGGCCTGGATGTTGTGAACACAAAAACCATGCAACCTGTTCCTGCTGATGGTAAAACTGTTGGTGAGATTGTGATGCGGGGTAATGTTGTGATGAAAGGCTACTTAAAGAACCCTGAAGCTAACAAGGAGACCTTTGCAAATGGATGGTTTCATTCTGGGGATCTTGCTGTGAAGCATCCAGATGGGTATATAGAAATCAAAGACAGGTCAAAGGACATCATCATATCTGGTGCTGAAAATATCAGCAGTGTAGAGATAGAGAATACTTTGTACTCGCATCCTGCAATACTGGAGGCTGCAGTGGTTGCAAGGGCTGATGAAAAATGGGGTGAGTCTCCCTGTGCTTTTGTGACATTAAAGCCAGGAGTGAATAATAGCGATGAGCAGCGTATAGTTGAGGATATACTCAAGTTCTGCAGGGCCAAGATGCCTGCTTATTGGGTCCCAAAATCAGTTGTGTTTGGACCCTTACCTAAGACAGCTACTGGGAAGATACAGAAGCATTTACTGAGGGCCAAGGCAAAAGAGATGGGACCTGTCAAGATGAGCAAGTTGTAA 1701 0.4691 MVGARDIDELPKNAANYTALTPLWFLERAAQVHPTRKSLIHGSRHYTWQQTYHRCRRFASALSNHSIGLGNTVAVIAPNVPALYEAHFGIPMAGAVLNPVNIRLNASTVAFLLGHCSAAAVIVDQEFFSLAEEALRIWSEKAKTFSPPLLIVVGDENCDPESLRYALGKGAIEYEDFLQSGDPEYAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMTEGAVYLWTLPMFHCNGWCYSWTLAALCGTNICLRQVTAKAVYEAIANYKVTHFCAAPVVLNTIINAPPEETILPLPHVVHVNTAGAAPPPAVLAGMSERGFRVTHTYGLSETYGPSVYCAWKPEWESLPPESQARLNARQGVRYIGLEGLDVVNTKTMQPVPADGKTVGEIVMRGNVVMKGYLKNPEANKETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENTLYSHPAILEAAVVARADEKWGESPCAFVTLKPGVNNSDEQRIVEDILKFCRAKMPAYWVPKSVVFGPLPKTATGKIQKHLLRAKAKEMGPVKMSKL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0384 566 Pfam AMP-binding enzyme C-terminal domain 466 545 IPR025110 -
Ssu6g0384 566 PANTHER ACYL-ACTIVATING ENZYME 4 566 - -
Ssu6g0384 566 CDD ttLC_FACS_AEE21_like 17 553 - -
Ssu6g0384 566 PANTHER DEPENDENT LIGASE, PUTATIVE-RELATED 4 566 - -
Ssu6g0384 566 Pfam AMP-binding enzyme 26 457 IPR000873 -
Ssu6g0384 566 Gene3D - 6 452 IPR042099 -
Ssu6g0384 566 SUPERFAMILY Acetyl-CoA synthetase-like 15 558 - -
Ssu6g0384 566 Gene3D - 453 560 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0384 Ssu-Chr6 6084956 6088860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0384 5 566 Miscellaneous Gene Families AT3G16910 76.377 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0384 K01913 - gmx:100811706 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0384 6 6084956 6088860 Ssu6g0384 6 6084956 6088860 ECH