Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0380 ATGGTCGACCACTTCATCACCTTTGACGTTGTTGACTCTGCTGACACACGCGCCAAGCTTTCTCACATTGCTCATGAAGTCACGCACCTCTTCTGGATCACCTTGCAGGCTCGTGCAGACGAAGAAGCCAACATCGCAGTCAACAAAACAAGGCTACTCAACGTTCTCACCACCCTCAAATCTTCCACATCATCCCGGCTCATCCACGTAATGGTCCAAACAGGCACCAAACACTACATGGGTCCGATCAACGACCCGGTCCGGTCCACACAATTCATCTGCCACGAGCCACCCTTTCACGAGAACATGCCACGGCTCCCTCACCCCAACTTCTATTACACGCTCGAGGATGTCCTTGAATCCTACGAGCCGTCGTTGACATACTCAGTGCACCGCTCCTCTATTATAATAGGATTGCCGTTTCGGTACCCAGGCACGAGGTACACGTGGGAGCATTTCTGTGACATGACCGATGCGGGAGTGTTGGCGCAGCAACACGTGTGGGCTGCGGTTACCCCCAAGGCTAAGAACCAGGCTTTCAATTGCACAAACAGCGACGTTTTTGTGTGGAAGAGCGTGTGGAAGCTGTTGTCTAAACTGTTCGATGTGGAGTTAATTTGTGGCATTTGA 630 0.519 MVDHFITFDVVDSADTRAKLSHIAHEVTHLFWITLQARADEEANIAVNKTRLLNVLTTLKSSTSSRLIHVMVQTGTKHYMGPINDPVRSTQFICHEPPFHENMPRLPHPNFYYTLEDVLESYEPSLTYSVHRSSIIIGLPFRYPGTRYTWEHFCDMTDAGVLAQQHVWAAVTPKAKNQAFNCTNSDVFVWKSVWKLLSKLFDVELICGI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0380 209 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE-LIKE 138 206 - -
Ssu6g0380 209 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE-LIKE 1 138 - -
Ssu6g0380 209 Gene3D - 2 207 - -
Ssu6g0380 209 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 138 206 - -
Ssu6g0380 209 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 1 138 - -
Ssu6g0380 209 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 204 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0380 Ssu-Chr6 6046831 6047532 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0380 - - gmx:100812240 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0380 6 6046831 6047532 Ssu6g0380 6 6046831 6047532 ECH