Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0369 ATGTCGGCCAGTGGTGGCGCCGCCATCGCCGGCGGGAGCCGCAACCGCAATCGGCATCTCGGCGAGAACCGCTTCTACAGTCCGCCGCCGCTGCGGAAACACAGAGAGAAGCAGGAGCAGCAGAGGTCGTCGCTGTCGAGGACTTCGTCGGAGAACAGGCCCGGTTCCTCTTCCGATTGTTCGATTTCTTCGCGCGCCACATCGGACATGTCCAATTTGGATCGATTCTTGGAGCACATCACGCCCCTTGTTCCCGCCCAATATTTTCCCAAGACAAACTCGAGGAGATGGAAAACGAGGGAGGCAGAATTGCACCCTTACTTTGTGCTTGGGGACCTGTGGGAGTCTTTTAAGGAATGGAGTGCTTATGGGGCAGGTGTTCCTATAGTGTTGAATGGGAGTGAATCCGTGACGCAGTATTATAACGTCTCCTTGTCTGCCATTCAGCTGTATATCGATCCATCAAAGCCTTCCACACGGCTAAGGAAACCCAGTCAAGAAAGTGACTCTGAATCAGCTAGAGAGACAAGCAGTGACAGCAGCAGTGGCTATTGCCATGAAAGAGGAGCTAAGAGTGCTCATGGCAGTAGGAATCATCTTAATGTTTTGGATGCAAGCAATCATGCTCTGGAAAGGGTCTCACAGGGTAAACCTTTCGTGGGTTCATCAAGTGATGAGACTGAGAGCTGCAACCCTCCTGGTCAGCTTATATTTGAATACTTTGAGCATGAGACCCCTTATAATCGTGAGCCATTAGCAAATAAGATTTCTGATCTTGCACGTCAATTTCCAGAGTTGAAAACATACTGGAGCTGTGATCTTTCCCCTGCAAGTTGGGTTTCATTTGCTTGGTATCCAATTTATAGAATACCTACTGGTCCAACATTACAGAGCCTGAGTGCTTGCTTCCTGACCTTCCATTCCCTGTCAACAGCTTTGCAAAGTTCAAATTCTGATGGGCTACATAATCATTATTCAAGAGGTAGGGACATATCCAAGCTATCATTACCGATCTTTGGGCTTGCCTCTCACAAGTTCAAAGTTTCTGTCTGGGATCCTGATGGAGTTTCTGAATGTCAGAAAGCCAATTCTCTGTCGCGAGCTGCTGAAAACTGGCTTAGGCTATTGCGAGTCAATCATCCTGATTACAATTACTTTGTGTCTCGTTACACACATTTGAGATGA 1185 0.481 MSASGGAAIAGGSRNRNRHLGENRFYSPPPLRKHREKQEQQRSSLSRTSSENRPGSSSDCSISSRATSDMSNLDRFLEHITPLVPAQYFPKTNSRRWKTREAELHPYFVLGDLWESFKEWSAYGAGVPIVLNGSESVTQYYNVSLSAIQLYIDPSKPSTRLRKPSQESDSESARETSSDSSSGYCHERGAKSAHGSRNHLNVLDASNHALERVSQGKPFVGSSSDETESCNPPGQLIFEYFEHETPYNREPLANKISDLARQFPELKTYWSCDLSPASWVSFAWYPIYRIPTGPTLQSLSACFLTFHSLSTALQSSNSDGLHNHYSRGRDISKLSLPIFGLASHKFKVSVWDPDGVSECQKANSLSRAAENWLRLLRVNHPDYNYFVSRYTHLR 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0369 394 MobiDBLite consensus disorder prediction 43 66 - -
Ssu6g0369 394 PANTHER OS07G0246600 PROTEIN 17 390 - -
Ssu6g0369 394 MobiDBLite consensus disorder prediction 156 197 - -
Ssu6g0369 394 MobiDBLite consensus disorder prediction 160 174 - -
Ssu6g0369 394 PANTHER T15D22.8 17 390 - -
Ssu6g0369 394 MobiDBLite consensus disorder prediction 28 42 - -
Ssu6g0369 394 MobiDBLite consensus disorder prediction 1 66 - -
Ssu6g0369 394 Pfam Protein of unknown function (DUF789) 71 386 IPR008507 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0369 Ssu-Chr6 5835102 5839685 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0369 - - gmx:100796604 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0369 6 5835102 5839685 Ssu6g0369 6 5835102 5839685 ECH