Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3553 ATGCAATTTATGGGTAATGAGAAGTCAAATAAGCACTGGGAGACTAAAATGCCACCAAAGTTTGATAGAAGTAAATTGGGAATTGAGAAGTTTATCCGTGCCAAGTATGTGGAGAAAAGATGGGCTTCAAAAGATGAACTGCAATCAATTTCAAGGTCAGCTGAAACAATCTATAATGTTGATGAGTCACCAAATGGAGGGGCTAGGAGTGCTATTCTGAAGAACAACAGGAGACTTTCTCTTGAAGAAAGCATTCTTGCTAACCACGTGGCACAAATTCTACCACCAATAACAAGATCTCGGGGGGGTTTCATAGACACGCAAAAGAAGAATTCACCTCCATTAAAAAGTCCATCCTCATCAGTTGATTTTGACAAGTCCACAGGAAAGAGCAATGGTACTGGTGACATTTTCAACTTGCTTTGCATCTATGACGATGCCCAGAACTTCTCAACCGATTATGATTCTTCCCCTTTTCAAACTGCTTAA 489 0.4008 MQFMGNEKSNKHWETKMPPKFDRSKLGIEKFIRAKYVEKRWASKDELQSISRSAETIYNVDESPNGGARSAILKNNRRLSLEESILANHVAQILPPITRSRGGFIDTQKKNSPPLKSPSSSVDFDKSTGKSNGTGDIFNLLCIYDDAQNFSTDYDSSPFQTA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3553 162 MobiDBLite consensus disorder prediction 100 135 - -
Ssu5g3553 162 SUPERFAMILY ArfGap/RecO-like zinc finger 1 43 IPR037278 -
Ssu5g3553 162 Gene3D Arf GTPase activating protein 1 50 IPR038508 -
Ssu5g3553 162 MobiDBLite consensus disorder prediction 104 135 - -
Ssu5g3553 162 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 152 IPR044520 GO:0005096
Ssu5g3553 162 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 1 152 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3553 K12486 - gmx:100803735 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3553 5 86777861 86783637 Ssu5g3553 5 86777861 86783637 ECH