Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3533 ATGGCATACCCAGCCAAGAAGTTCATCAACGACCCCAACGATGTTGTTACCGAATACATTGAAGGTCTTGTGCAGACTTATACTGGCCTCCAATATTTAGATGGCTTTCCACAGGTGAAGGTTGTGTTACGTGCCGATGTTTCATGTACAACATTTGATAAAGTTGCTATCATATCAGGGGGAGGAAGTGGCCATGAGCCTGCTCAAGCTGGATATGTGGGAGAAGGAATGCTGACGGCAGCCATCTGCGGAGACATCTTTGCCTCTCCGCCAGTTGATTCAATTCTAGCTGGGATACGAGCTGTAACTGGTCCTATGGGATGTCTTCTGATTGTCACGAACTATACTGGTGATCGTTTGAACTTTGGTTTGGCTGCTGAACAAGCAAAGTCTGAAGGTTACAAAGTAGAGACTGTAATTGTTGGGGATGATTGTGCCTTGCCTCCACCTCGAGGAATTGCTGGAAGAAGAGGTTTGGCAGGCACTATTCTGGTTCATAAGGTTGCAGgagctgctgctgctgctggcCTTTCTCTAATTGATGTTGCTGCAGAAGCAAAACGTGCATCTGAAATGGTGGGCACGATGGGTGTTGCATTATCCATTTGCACACTTCCTGGTCAGGTTACATCAGATCGTTTGGGCCCTGAAAAGATGGAATTGGGTCTTGGAATTCATGGAGAACCTGGTGCAGCTGTAGCGGATCTTCAGCCTGTAGATGTAATGGTTTCTCATGTTCTTAAGCAAATTTTGTCTCCGGAAACAAACTATGTTCCAATAACACGAGGTTGTAGAGTGGTCCTCATGGTCAATGGGTTAGGTGGCACCCCTTTAATGGAACTAATGATTGTGGCAGGAAAAGCAGTCCCAAAATTGCAGCTGGAGCATGGACTGGCTGTTGATAGGGTTTATACAGGGTCATTTATTACTTCTCTCGATATGGCAGGTTTCTCAATTTCTATCATGAAAGCTGATGCATCTATTCTTCAACGATTAGACGCTGCAACTAAAGCTCCTTATTGGCCTGTTGCCGTAGATGGTAATCGCCCACCTGCCAAGATTCCTGTTCCAGTTCCACCATCTCAATCAACCAAGAGTGACAAGCCACAGAGTCGGCCAGTTTCACTAAATGAGCAAGGCCATGTTCTTCAGGAAGCCATCGAAGCTGCTGCAAATGCAATTATAAATCTTAAGGACAGTCTAAATGAATGGGATAGCAAAGTTGGTGATGGTGACTGTGGATCAACTATGTATAGAGGTGCAAAAGCAGTTCTTGAGAACATCAAAAATTATCCTCTGAATGATGCTGCAGAGACTGTTGGTGAAATTGGATCATCAATTGGAAGAGCTATGGGAGGAACAAGCGGGATCATatatacaattttttgtaaggcAGCATATGCACAGCTGAAAGCAATTTCTCACTCTGGTGTCACACCAAAACAATGGGCTGAAGCACTTGCAGCTTCCATTGCTGCTGTCAGCAAATATGGGGGTGCCAGTGCTGGTTATAGAACATTGCTAGATGCCCTTATTCCAGCACTGTCAGTTCTTCAAGAGAGATTAAATTCTGGTGATGATCCTTCCATTGCCTTTGTTCTCTCCTCTGAAGCTGCATTAGCTGGAGCCGAGTCAACCAAGAACATGCAAGCACAGGCTGGGCGTTCAACTTATGTGTCGGGAGAGATTCTTTCATCAGTTCCTGATCCTGGTGCAGTGGCTGCTGCTTCGTGGTACAGAGCTGCGGCCTTAGTTGTTCAGCGAAAAAGCAAGAGTTAA 1779 0.4452 MAYPAKKFINDPNDVVTEYIEGLVQTYTGLQYLDGFPQVKVVLRADVSCTTFDKVAIISGGGSGHEPAQAGYVGEGMLTAAICGDIFASPPVDSILAGIRAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGIAGRRGLAGTILVHKVAGAAAAAGLSLIDVAAEAKRASEMVGTMGVALSICTLPGQVTSDRLGPEKMELGLGIHGEPGAAVADLQPVDVMVSHVLKQILSPETNYVPITRGCRVVLMVNGLGGTPLMELMIVAGKAVPKLQLEHGLAVDRVYTGSFITSLDMAGFSISIMKADASILQRLDAATKAPYWPVAVDGNRPPAKIPVPVPPSQSTKSDKPQSRPVSLNEQGHVLQEAIEAAANAIINLKDSLNEWDSKVGDGDCGSTMYRGAKAVLENIKNYPLNDAAETVGEIGSSIGRAMGGTSGIIYTIFCKAAYAQLKAISHSGVTPKQWAEALAASIAAVSKYGGASAGYRTLLDALIPALSVLQERLNSGDDPSIAFVLSSEAALAGAESTKNMQAQAGRSTYVSGEILSSVPDPGAVAAASWYRAAALVVQRKSKS 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3533 592 MobiDBLite consensus disorder prediction 359 376 - -
Ssu5g3533 592 Coils Coil 383 403 - -
Ssu5g3533 592 Gene3D Dihydroxyacetone kinase; domain 2 194 346 - -
Ssu5g3533 592 PANTHER TRIOKINASE/FMN CYCLASE 1 588 - -
Ssu5g3533 592 TIGRFAM dak_ATP: dihydroxyacetone kinase 6 582 IPR012734 GO:0004371|GO:0005524|GO:0006071
Ssu5g3533 592 Pfam Dak1 domain 22 339 IPR004006 GO:0004371|GO:0006071
Ssu5g3533 592 PANTHER DIHYDROXYACETONE KINASE 1 588 - -
Ssu5g3533 592 SUPERFAMILY DhaL-like 377 582 IPR036117 GO:0004371|GO:0006071
Ssu5g3533 592 ProSiteProfiles DhaL domain profile. 381 584 IPR004007 GO:0004371|GO:0006071
Ssu5g3533 592 Pfam DAK2 domain 407 582 IPR004007 GO:0004371|GO:0006071
Ssu5g3533 592 SUPERFAMILY DAK1/DegV-like 6 344 - -
Ssu5g3533 592 MobiDBLite consensus disorder prediction 351 376 - -
Ssu5g3533 592 Gene3D - 378 587 IPR036117 GO:0004371|GO:0006071
Ssu5g3533 592 ProSiteProfiles DhaK domain profile. 11 341 IPR004006 GO:0004371|GO:0006071
Ssu5g3533 592 SMART Dak2_2 407 584 IPR004007 GO:0004371|GO:0006071
Ssu5g3533 592 Gene3D Dihydroxyacetone kinase; domain 1 16 191 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3533 - - qsu:112019625 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3533 5 86339953 86357802 Ssu5g3533 5 86339953 86357802 ECH