Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3523 ATGGACGTGGCAGTCACTGCCGTCCGGTCACCGGCGATCGTCTTCGGAAGACCGATGGACGGGTCTGCCTCAGCTCGGTTCGTTTCCGCTTTTGGGTTTTCCAGAAAGCTATGCTTCACTTCACTATCAGTATCTATCCCCAAGCAAGGTCGTAGGAGAGTCTGTGTTGGGAGTAGAAGAGGGTTAGTAGTTAGCGCTGCATCGTCTTCTTCAGAGTCATCTGAATCGGATGCCACTGCCAAGATCGCTCCTCTCCAGTTGGAGTCTCCAATTGGGCAGTTTCTTTCTCAGATTTTGATAAATCACCGGCATCTTGTGCCTGCTGCCGTAGACCAGCAGCTTGAGCAGCTCCAAACTGACCGCGATGCTGCTCAACAAAAGGAAGAGCCTTCTGCTTCAGCCACTGATTTAGTTTTGTACAGGAGAATTGCTGAGGTGAAGGCTAATGAAAGGAGGAAAGCTCTGGAAGAGATCTTGTATGCATTGGTGGTGCAGAAGTTCATGGATGCTAATATTTCTTTGATACCCTCCATAACCCCAGATCTGTCTGGTAAGGTTGATTTGTGGCCAAATGAAGATGGTAAACTTGAGCAGCTTCACTCACATGAAGCATATGAGATGATTCAAAACCACTTGAGTCTTATTCTGGGTAACAAAGTAGGAGATTTAACATCAATAGCTGAAATCAGCAAATTCAGGGTAGGGCAGGTCTATGCAGCATCAGTGATGTATGGTTATTTTCTGAAGCGAGTTGACCAAAGGTTCCAGCTGGAGAAGACAATGAAAATTCTTCCAAATGCAACAGAAAAAGAGAATAGTGTTCACCAAACTACAATGGACAATGCAAGACCCAGTATTGAAGAGGACTCTTCTCAAGTGATGTCTCATCCTGAAGTATCTACCTGGCCTGGGGGTGATGTCAGTCCTGGTGGATTTGGCTATGATATAAAGGCAACCAGGTTGCGCAACTATGTGATGTCCTTTGACAGTGATACCCTACAAAGATATGCAACAGTTAGATCCAAAGAGGCGGTCAGCATCATTGAGAAGCACACAGAGGCATTGTTTGGAAGACCTGAAATTGTTGTAACACCCGAGGGGGCAGTCTCTAAGGATGAAAACATCAAAATTAGCTTTGGTGGTTTAAAGAAACTTGTTTTAGAGGCTGTGACTTTTGGGTCTTTTCTCTGGGATGTTGAGAGCTACGTGGACTCAAGGTACCATTTTGTCTTGAACTGA 1239 0.4544 MDVAVTAVRSPAIVFGRPMDGSASARFVSAFGFSRKLCFTSLSVSIPKQGRRRVCVGSRRGLVVSAASSSSESSESDATAKIAPLQLESPIGQFLSQILINHRHLVPAAVDQQLEQLQTDRDAAQQKEEPSASATDLVLYRRIAEVKANERRKALEEILYALVVQKFMDANISLIPSITPDLSGKVDLWPNEDGKLEQLHSHEAYEMIQNHLSLILGNKVGDLTSIAEISKFRVGQVYAASVMYGYFLKRVDQRFQLEKTMKILPNATEKENSVHQTTMDNARPSIEEDSSQVMSHPEVSTWPGGDVSPGGFGYDIKATRLRNYVMSFDSDTLQRYATVRSKEAVSIIEKHTEALFGRPEIVVTPEGAVSKDENIKISFGGLKKLVLEAVTFGSFLWDVESYVDSRYHFVLN 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3523 412 Pfam Protein of unknown function (DUF760) 138 261 IPR008479 -
Ssu5g3523 412 PANTHER EXPRESSED PROTEIN 1 412 - -
Ssu5g3523 412 PANTHER EXPRESSED PROTEIN 1 412 IPR038925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3523 Ssu-Chr5 86250448 86252831 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3523 - - gmx:100793300 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3523 5 86250448 86252831 Ssu5g3523 5 86250448 86252831 ECH