Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3508 ATGGGCAATGCAGCTTCTTGCACTCCTTCCTTGATACCTAATGGGGTCTTCAAGGTCCTATTCTTAGATGGGAGGCTAGAGGCGTACACAAAACCAATGAGAGCTGCAGAACTCATGCTAGAATACCCTGGACAGTTTGTTTGTGACTCTAGCTACCTCAAAGTGGGACACCGCATTCAAGGGCTCCTAGCTGATGAAGAACTTGAAAGGCGCAAATTCTACTTCCTTCTACCAATGGAGCTGTTGTACTCTGTCCTAACCCATGAAGAAATGAGCTCTCTTAATTACAAAGCATCCAGGGCAACCAAGCACCGAAGTTTTAACAACTTGGGAAAGATTTTTCCAGTGTTTAGTGAATTTTGTATGTTCCCTTCGGAGCTAAAGAGATTAGAAGCTGATAATCAGGTGGTGAGGGAGCCAGAACCAGTCGAAAGGTACCCCAAACAGAGATCTTGGAAACCGGCACtggagaccattgatgaaactCTATGA 492 0.435 MGNAASCTPSLIPNGVFKVLFLDGRLEAYTKPMRAAELMLEYPGQFVCDSSYLKVGHRIQGLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHRSFNNLGKIFPVFSEFCMFPSELKRLEADNQVVREPEPVERYPKQRSWKPALETIDETL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3508 163 Pfam PADRE domain 1 161 IPR025322 -
Ssu5g3508 163 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 162 - -
Ssu5g3508 163 PANTHER DUF4228 DOMAIN PROTEIN 1 162 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3508 - - gmx:100820022 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3508 5 86004015 86004506 Ssu5g3508 5 86004015 86004506 ECH