Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3488 ATGGGTACTGTCATCGACTCCCATTTCTTAGCCCTCACTGCCCTTGTCACTATTGGCTATCAGTTTCTGTTTTTCGTCGTCACTGCGCTCCTCAAATTCGACAAAGTCACTGATTTTGCTGGAAGTACGAATTTCATTATAATTGCTGTATTGACCCTGGTGATCAAAGGCTCCTGGTATTTTCGACAGATAATCCTGACTTTGTTTGTTGGGATATGGGGACTTCGCCTGGCGCTTTTCCTCTTATTCagAATTTTGCAGTGGGGAGAGGACCGACGCTTTGATGAAATGCGCAATAATTTGGGTAGATTGGCCATATTTTGGATATTTCAGGCTGTCTGGGTGTGGGCTGTGAGTTTACCTGTTACAGTGGTCAATGCAAGCGACAGAAATCCCTTTCTACAGGTTGTTGATATAGTAGGGTGGATTTTGTGGTCTGTGGGTTTTATTGCGGAAGGTACAGCAGATCAACAAAAGCTGCACTTCAAAAGATCTTCAGAAAATAGAGGGAGGTGGTGTAATGTTGGACTCTGGAAATATTCTCGTCATCCTAACTATTTTGGTGAGATATTGCTTTGGTGGGGAATTTTTGTGGCATCTACACCTGTACTAAAGGGTGCTGAATGGCTGGTAATCATTGGACCAATCTTTCTcacattgttgcttctttttatCAGTGGCATTCCACTGCTTGAGGATTCAGCAGATAAGAAGTTTGGCAACGTAGATGCATATAGGATATACAAAAAGAGAACCAGCCCTTTAATCCCGTTGCCACCATCAGTCTATGGGAACTTACCCGCATGGTTCAAAACAACTTTTCTCTTTGAGTTTCCATTCTACAGTCGTAATCTTCCACAAGAAGAGAACTGGTGTAGAGCAAGCAGTGATACTCAGAAAATTGGCTAG 909 0.4202 MGTVIDSHFLALTALVTIGYQFLFFVVTALLKFDKVTDFAGSTNFIIIAVLTLVIKGSWYFRQIILTLFVGIWGLRLALFLLFRILQWGEDRRFDEMRNNLGRLAIFWIFQAVWVWAVSLPVTVVNASDRNPFLQVVDIVGWILWSVGFIAEGTADQQKLHFKRSSENRGRWCNVGLWKYSRHPNYFGEILLWWGIFVASTPVLKGAEWLVIIGPIFLTLLLLFISGIPLLEDSADKKFGNVDAYRIYKKRTSPLIPLPPSVYGNLPAWFKTTFLFEFPFYSRNLPQEENWCRASSDTQKIG 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3488 302 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 5 297 IPR010721 -
Ssu5g3488 302 Gene3D - 59 258 - -
Ssu5g3488 302 Pfam Protein of unknown function (DUF1295) 24 252 IPR010721 -
Ssu5g3488 302 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 141 209 IPR001104 GO:0006629|GO:0016627
Ssu5g3488 302 PANTHER - 5 297 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3488 - - ccaj:109799461 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3488 5 85718682 85723942 Ssu5g3488 5 85718682 85723942 ECH