Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3478 ATGACACTGACACTGCCTTCTCCAAAATCACCATTCTTCAAGACCCTTTTGTTCCTGTGCACTCTCCTCCCTTGCTCCCTGGCTCTCCCTGACCCTGATGCTGCAGAATCAGCTCAGCCAATCATCCCAAACCCATCTTCAACAGGAACAATCCCTGCATTCCCGGAACAAGCTGATGTTGCAGGGTGCCCTCTGAACCTCTCAGATGAGCACTATGAAGGGATAAAGAGTGCATGCGGCTCCAACAAAGATGGTGCACATACGGACCTCCACCGTAGCAGATGCTGTCCTGTGCTGGCTGCTTGGCTCTACTCGGCATACTCAGCCACTGCCCTTAGTGGTGGAATGCAGCATGAACATGCCTCACAAGGCCATACCACATCCTATGACATGCCCTTGTTGCCTGATGATTCAGAAACATGTGTGAGTGACTTGGGGAAGGCTTTGAAAGTTAGAGGAATTCAGCTTGTTCAGCCCAATGAGACTTGTGATGTCGTGTATTGCTACTGTGGCATTAGGCTTCACCCCTTGACCTGCCCTGAGTCTTTTTCAGTTACTCCAAGTGGGAGTCTTCTTGTGGATGAAAGGGTGAAAATATTGGAGAGGAATTGCTTGAGTAGCAGCaccaatttcaataaatttcccGGCCTCGGAGGATGCTCCAAGTGCTTGCATAGTCTCTATTCGCTTAGAAAGAAGTCTTCAAATTCAAGCAAGTCAGAAGATAGGACCACCAAGATCCATAACAAAGACTGTGAACTCATGGGCCTGACATGGCTTCTGGCTCAGAATAGAACAGCTTACATTCACACAGTTTCTGGGGTACTTCGTGCTTTGATGTTGAGCACTGATGGCTCTGACCCACAATCATGCACTCTAAACAGTGATGGAATGCCTCTTGCCGTTGATTCCTCTGAAATaaggtaa 927 0.4725 MTLTLPSPKSPFFKTLLFLCTLLPCSLALPDPDAAESAQPIIPNPSSTGTIPAFPEQADVAGCPLNLSDEHYEGIKSACGSNKDGAHTDLHRSRCCPVLAAWLYSAYSATALSGGMQHEHASQGHTTSYDMPLLPDDSETCVSDLGKALKVRGIQLVQPNETCDVVYCYCGIRLHPLTCPESFSVTPSGSLLVDERVKILERNCLSSSTNFNKFPGLGGCSKCLHSLYSLRKKSSNSSKSEDRTTKIHNKDCELMGLTWLLAQNRTAYIHTVSGVLRALMLSTDGSDPQSCTLNSDGMPLAVDSSEIR 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3478 308 Pfam SPARK 61 243 IPR043891 -
Ssu5g3478 308 MobiDBLite consensus disorder prediction 286 308 - -
Ssu5g3478 308 PANTHER GPI-ANCHORED PROTEIN 1 307 IPR040376 -
Ssu5g3478 308 PANTHER PROTEIN, PUTATIVE-RELATED 1 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3478 Ssu-Chr5 85622659 85633087 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3478 - - vun:114179502 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3478 5 85622659 85633087 Ssu5g3478 5 85622659 85633087 ECH