Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3477 ATGGCCTTATTATActcacaaaattacaaaatagagGTCCCTGATATTTTAattcgtttttttttctttttttttttttcccccttagAAAACCACTACTATATAAACCCTATGCTGAAAGCAACCACCACCAACTCTGCAGTGGCTTCTGCTATACACTCTTTGCTTATGCGTTGTTTGTCTCTCACTCTTCTCTTGTGCATTGCCTTTTTGGTCATGGCTGCCTCCGTTGAACCCCTAGTGGTTGGTCGTGTGATTGGTGATGTTGTTGACATGTTCATTCCATCTGTTAGCATGTCTGTGTACTTTGGCTCCAAGCATGTCACCAATGGGTGTGACATCAAGCCTTCCATGGCTATTAGCCCACCCAAGGTGACTCTCACTGGCAACATGGATAACCTTTACACCCTGGTTATGACGGATCCTGACGCACCAAGCCCCAGTGAGCCAAGCATGCGCGAGTGGATTCATTGGATCGTGGTTGACATACCTGGGGGAACAAACCCAACTCGCGGGAAAGAGATTCTTCCCTACGTGGGACCAAGGCCACCCGTGGGGATACACCGCTACATCTTTGTGCTTTTTCAACAGAAAGAACCTTTGGGTCTTGTGGAGCAGCCACCAGCTCGCGCCAGCTTCAACACTCGCTATTTCGCCAGGCAATTGGACTTGGGTCTCCCAGTGGCCACTGTCTACTTCAACTCTCAGAAGGAGCCCGCAACTAAGAGGCGCTGA 735 0.4599 MALLYSQNYKIEVPDILIRFFFFFFFSPLENHYYINPMLKATTTNSAVASAIHSLLMRCLSLTLLLCIAFLVMAASVEPLVVGRVIGDVVDMFIPSVSMSVYFGSKHVTNGCDIKPSMAISPPKVTLTGNMDNLYTLVMTDPDAPSPSEPSMREWIHWIVVDIPGGTNPTRGKEILPYVGPRPPVGIHRYIFVLFQQKEPLGLVEQPPARASFNTRYFARQLDLGLPVATVYFNSQKEPATKRR 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3477 244 CDD PEBP_euk 97 235 IPR035810 -
Ssu5g3477 244 Pfam Phosphatidylethanolamine-binding protein 114 232 IPR008914 -
Ssu5g3477 244 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 135 157 IPR001858 -
Ssu5g3477 244 PANTHER BNAA06G12320D PROTEIN 73 244 - -
Ssu5g3477 244 Gene3D - 72 244 IPR036610 -
Ssu5g3477 244 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 73 244 IPR035810 -
Ssu5g3477 244 SUPERFAMILY PEBP-like 70 237 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3477 Ssu-Chr5 85606726 85608733 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3477 - - aprc:113856398 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3477 5 85606726 85608733 Ssu5g3477 5 85606726 85608733 ECH