Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3474 ATGgcgttttctcttttctctgcACCCTTCATTCATCCCCAACTCGTCCCTATTGTGGCCAAAATGACCCTTTTTGACACCATACTCTTCTATgtGATACATTTTGTGGACAAGCTTGGGTTGTGGCATAGGCTGCCAGTGTTGTTGGGATTAGCGTACTTGGGAATTAGGAGGCACTTGCATTATCGTTACAATTTGTTGCATGTTGGAGGAGTCAATGGCCACAAGTATGATACACAAGAGTATGCATATAGGACAGCGACTGGTAATTGCAACCACCCCACCGACCATTTGATTGGTAGTCAGGGGACTTGCTTTGGCCGGAACATGCCGCCGGCGACCTTAGATTATGGGTTACTGGACCCTCACCCAACCCTGGTAGCCTCAAAGCTCCTAgcaagaaagaatttcaaagaGGCAGGGAAGCAATTCAACATGATAGCTTGCGCATGGATACAGTTCATGATTCATGACTGGATTGACCATTTAGAGGACACTGAACAGGTGGAAATTAGAGCTCCTGATGGTTATTCAAGTGGATGTCCTTTAAAGTCTTTCAAGTTTTTCAAGACTAGGAAATTCAAAACAGGCTCTTCATGTATGAAGTTTAGCTTCCTAAACATTAGGACTCCTTGGTGGGATGGAAGCGTCATATATGGGAATAACAAGAAGGGCATGAGAAGAGTGAGGACATTCAAAGATGGAAAGCTGAAGATCTCAGAAGATGGGCTTCTTGAGCATGATGAGAAAGGTATTCCTATTTCAGGTGATGTTAGAAATTGCTGGGCTGGCTTTTCCCTTATGCAGGCCTTGTTTGTCAAAGAGCATAATGCCGTATGTGATATGCTAAAAATGCACTATCCTGATTTTGATGATGAGCAGCTCTATAGACATGCAAGATTGGTGACTTCAGCAGTCATTGCAAAAATTCACACAATTGATTGGACTGTAGAACTCCTAAAGACTGATACTCTTCTGGCAGGGATGAGGATCAACTGgTATGGATTTTTGGGGAAGacatttaaagatttatttggAAACATTTGTGGACCAGTACTTAGTGGATTAGTTGGCCTTAGGAAGCCAAGAGATCATGGAGTTCCCTACTCACTTACTGAAGAGTTTGTGAGCGTTTACAGAATGCATTCACTGCTACCGGATGAAATTGTCCTCCGAGATATCAAGCCTTCGAGAGGAGAATATAAATGCCCTCAAATACTTAAAAAGGTGCCTATGAGGGAAATGTTGGGAAAAGAAGGGGAAAGAAGGCTATCAAACATAGGAATGGAGCAAATGCTAGTATCCATGGGTCATCAATCCTGTGGTGCAGTTGCTTTATGGAACTATCCAACCTGGTTAAGGAACCTCATTGCCCATGATATTAATGGAGAAGATAGATCTGATCCAGTTGACATGGCTACCATGGAAGTTtatagagatagagaaaggggaGTTACAAAGTATAATGAATTCAGAAGAAACTTGCTAATGATCCCTATTAGCAAGTGGGAGGATTTAACAGATGATGAAGAGGTCATTGAAGCTCTTAAAGAGGTATATGAAGATGATGTTGAAAAGCTGGACTTGATAGTGGGTCTCCATGCAGAGAAGAAGATAAAAGGGTTTGCTATCAGTGAGAccgctttttttattttcctaattatggCTTCGAGGAGGCTGGAAGCTGATCGTTTCttcacaaaaaatttcaactCCAAAACATATACTGATAAAGGGCTTGAATGGGTAAACAGAACAGAGACTTTGAAGGATGTGATTGATAGACACTTTCCTGAAATGACTAAAAAATGGATGAGGAGCTCAAGTGCATTCTGTGTTTGGGATTCATTGCCAGATCCCACAAACTACATGCCTCTATATCTGAGACCAGCCCCATAA 1899 0.3971 MAFSLFSAPFIHPQLVPIVAKMTLFDTILFYVIHFVDKLGLWHRLPVLLGLAYLGIRRHLHYRYNLLHVGGVNGHKYDTQEYAYRTATGNCNHPTDHLIGSQGTCFGRNMPPATLDYGLLDPHPTLVASKLLARKNFKEAGKQFNMIACAWIQFMIHDWIDHLEDTEQVEIRAPDGYSSGCPLKSFKFFKTRKFKTGSSCMKFSFLNIRTPWWDGSVIYGNNKKGMRRVRTFKDGKLKISEDGLLEHDEKGIPISGDVRNCWAGFSLMQALFVKEHNAVCDMLKMHYPDFDDEQLYRHARLVTSAVIAKIHTIDWTVELLKTDTLLAGMRINWYGFLGKTFKDLFGNICGPVLSGLVGLRKPRDHGVPYSLTEEFVSVYRMHSLLPDEIVLRDIKPSRGEYKCPQILKKVPMREMLGKEGERRLSNIGMEQMLVSMGHQSCGAVALWNYPTWLRNLIAHDINGEDRSDPVDMATMEVYRDRERGVTKYNEFRRNLLMIPISKWEDLTDDEEVIEALKEVYEDDVEKLDLIVGLHAEKKIKGFAISETAFFIFLIMASRRLEADRFFTKNFNSKTYTDKGLEWVNRTETLKDVIDRHFPEMTKKWMRSSSAFCVWDSLPDPTNYMPLYLRPAP 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3474 632 Pfam Animal haem peroxidase 84 601 IPR019791 -
Ssu5g3474 632 Gene3D Haem peroxidase domain superfamily, animal type 2 617 IPR037120 -
Ssu5g3474 632 PANTHER PROSTAGLANDIN G/H SYNTHASE 5 632 - -
Ssu5g3474 632 CDD PIOX_like 85 615 IPR034815 GO:0016491
Ssu5g3474 632 PANTHER ALPHA-DIOXYGENASE 2 5 632 - -
Ssu5g3474 632 ProSiteProfiles Animal heme peroxidase superfamily profile. 74 632 IPR019791 -
Ssu5g3474 632 SUPERFAMILY Heme-dependent peroxidases 81 630 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3474 Ssu-Chr5 85578493 85582154 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g3474 10 629 Acyl Lipid Metabolism Gene Families AT3G01420 62.379 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3474 K10529 - nnu:104587776 1086.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3474 5 85578493 85582154 Ssu5g3474 5 85578493 85582154 ECH