Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3472 ATGCTTTCTGTGAGGGATTTTTGGAGGCGGCATAGGAGGAAGATTTTCGTCACTGGTGGTGTTTTAGGAAGTGGGTATCTTTTGTACAAGCTCTATGGTGCTCACAGGCATGGAGTTCAGGTACTTGAAAGAGAACTCGCAGTTCAGAGGGAATCCGAGGAGCTTATGAAGGCTCAGATGCAAGCTCACTTTGAGAATATTCAGAGAATCTCTGATGTAACATTACCTCATGCTATGCACGACTTAAGTTGTCGGATTGCAGAAGAACTGGATCTTTCTCACCTTCTTGAAAGGCTAATACAAGGAAAGGGTCAGCCAAACACTTTAACACAATCAGAGAAACTAGATTTATGGAGTAGACTCAAAATTCTAAGTTTTACAAGAATGACGTTGTCAGTATGGGCTACAACAATGCTTAGCTTATATACAAAAGTTCAAGTCAATATACTAGGAAGGCATCTATACATTGATACAGCACGAGGCCTTGAAATCTCTGATTCAGTGGAAAGTGGAGACGTGGTTGATAGGGAAGACCAGAAGAAATTTCTAGACAGTGTCGATTTTCTCTCTCAGCATGGTATGCCTGCCTTGATTTCTGATGTGGAGGCAGCAACAAAAGAAGTTCTCAATGGAAAGCAGTTGAGTACTTTCTTCAACAGCACAACACTTCATGAAACTATCATGCAGATACTCAACACCTTCATGAGCATGGGGAGTCCAAATTCCTGGGTAAAGTATGTGATACCTGAAGATGTTAAATCATATTCCACAATCTCTGGCAGTGAGGACACCATGCCATCTGATGTGACTGAATTTGAACAACTTATGATGGAAGTACGGGCAGTCTTATCAagTGCTGAATTTGGAAGCGTTGTAGAGATATCTCTGAAAGCAGTTGTGGATACACTGGTGGAGCTCATTGGGGCTAAATTTAGTGGAGGAAGTGTAACTGCGGGCCTGCCACTGGCCAGGGTGTTACCTCAAGTTGCACAGATGTGTCCTTTACTCCTTGAAGAACCCAGCAAAAATCAGTTCatccaaattattaaaaatatacaggAGGTTGAACTTTTTTTCACTCTCCTCTATGCAAATATGCCACATGCATAg 1110 0.4126 MLSVRDFWRRHRRKIFVTGGVLGSGYLLYKLYGAHRHGVQVLERELAVQRESEELMKAQMQAHFENIQRISDVTLPHAMHDLSCRIAEELDLSHLLERLIQGKGQPNTLTQSEKLDLWSRLKILSFTRMTLSVWATTMLSLYTKVQVNILGRHLYIDTARGLEISDSVESGDVVDREDQKKFLDSVDFLSQHGMPALISDVEAATKEVLNGKQLSTFFNSTTLHETIMQILNTFMSMGSPNSWVKYVIPEDVKSYSTISGSEDTMPSDVTEFEQLMMEVRAVLSSAEFGSVVEISLKAVVDTLVELIGAKFSGGSVTAGLPLARVLPQVAQMCPLLLEEPSKNQFIQIIKNIQEVELFFTLLYANMPHA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3472 369 Pfam Peroxin-3 106 365 IPR006966 GO:0005779|GO:0007031
Ssu5g3472 369 PANTHER PEROXISOMAL BIOGENESIS FACTOR 3 6 367 IPR006966 GO:0005779|GO:0007031
Ssu5g3472 369 PANTHER PEROXISOME BIOGENESIS PROTEIN 3-2-LIKE 6 367 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3472 K13336 - gmx:100782816 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3472 5 85526406 85530624 Ssu5g3472 5 85526406 85530624 ECH