Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3453 ATGGAGCAGGAGCAGCTGGAGTATGTGTTGGTGCCATTGGGTCTGTTGGTGTTCCTGACATACCATGTCTGGCTTGTCTACACCATCCTACACAACCCTCTTCGAACTGTCATTGGCCTTAACGCTGAGTCTCGTCATCAGTGGGTTCTTTCCATGATGAGTGATCCGTTGAAGAATGGGGTTTTGGCAGTTCAAACTATTCGCAACAATATCATGGCTTCTACTCTTCTATCTACAGCAGCCATTACACTGAGTTCACTTATTGGTATTTTTGCTAGCAGTACGTGGAATTCTGATGCCCCGCCTTTCATATCTTATGGTAGTTCTTCAATCAAACATATTTCTATCACCATTTGCTTCCTTGTTGCATTTTTATGCAATGTGCAGTGTATAAGATACTATTGCCATGTCAGCTTCTTAATCACTGCACCAACACTCAGAGACCAAAGGGAGTATATGGAATATATTGCTAAGACTCTGAATCGTGGGAGTCATTCTTGGTCCATTGGACTTAGAGCATTTTACTTGTCATTTCCATTCTTCCTCTGGATTTATGGGCCCGTACCCATGTTTGCATGTTGCAGCTTGACAtgtcttattttgttcttcttgGATACAACAGCTAAAATCACACGGGATTTTCACAGTAGCTCATTCAAGAAGGAGAAGGGAACTCATGATGTAGAGTCTGCTGTGGAGCCTGATTACTATTATCCTTTACCTGGTGACAATTTGTCTCCAAACTCAGGTGTCAGtcatgtataa 765 0.4118 MEQEQLEYVLVPLGLLVFLTYHVWLVYTILHNPLRTVIGLNAESRHQWVLSMMSDPLKNGVLAVQTIRNNIMASTLLSTAAITLSSLIGIFASSTWNSDAPPFISYGSSSIKHISITICFLVAFLCNVQCIRYYCHVSFLITAPTLRDQREYMEYIAKTLNRGSHSWSIGLRAFYLSFPFFLWIYGPVPMFACCSLTCLILFFLDTTAKITRDFHSSSFKKEKGTHDVESAVEPDYYYPLPGDNLSPNSGVSHV 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3453 254 Pfam Protein of unknown function, DUF599 9 208 IPR006747 -
Ssu5g3453 254 PANTHER OS01G0683700 PROTEIN 1 237 - -
Ssu5g3453 254 PANTHER OS02G0292800 PROTEIN 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3453 Ssu-Chr5 85252758 85255421 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3453 - - gmx:100788312 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3453 5 85252758 85255421 Ssu5g3453 5 85252758 85255421 ECH