Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3394 ATGGAAGGGTCCTCCAAGGCGGTTAGTTTAAGAGATGAGCAAGCACAACCTGAAGCAAAGCCTCCTCACGAGGCTGTGTTTCTGGTCTTGGCATATCTTCCAGTGTACGAGATTGTGGTCATGTCTCAAGTTTGCACATCACTAAGGGATGCAGTGAACAACGACATATTACCATGGTTGAACGTTATTGTTGAAAGGCCTCTGAGTTGGCGACTCAATGATGAGATTCTAATGAAAATCACCTCCAAGGCCAATGGTAGGCTCAAAACTCTGGCTCTGATCAACTGTATGCGCGTTACCGACGAGGGGCTCCAAAGGGTCGTAGAACAAAACCCTCTCATAAACAAGCTCCATATACCAGCATGCACAGGCATAACCCCCGAAGGAGTTTTAAGAGCCGTGAAAACACTATGCCAAAGAAGCAATTGCTTAAAAACCTTAAGTATAAACGGCATCTACAACGTACAGAAGGAGCATCTTGACATGCTAACCATGAACCTTGGAAAGAATCTGCCATTAGAGGAGCAGCAAAAGAAGCAGCCTGTCTACTATCACGATCGTGGTAGCTTCTCAGTATTTAAGCACGATGAAAGCCGGTGGCTTATTGATTTGGAGATATGTCCCAGGTGCTTTGAGGTGAGGATGGTTTATGATTGCCCAAAAGGGCACTGCATGAGGAGGGAATGCCCCCTAGCTCCATGTAGGGGTTGCAAATTTTGTATTCCAAGGTGTGTAAACTGTGGTGGATGCATTGAATCCGGAGAAGTGGAAGAGGGAGCTTGTGAAGATATCTTGTGTCTTGAATGTTGGTTACAGCTTCCCAAGTGCAGTTTCTGTAACAAACCATACTGTAAGCAACATACAAATTGGTGGTGCACTTCTCCAGACTCTTCATTGATCTGTAAAGTTTGTGATGAAAATTCTCATGGATATACGTATACTGATGTTCTATAA 954 0.4444 MEGSSKAVSLRDEQAQPEAKPPHEAVFLVLAYLPVYEIVVMSQVCTSLRDAVNNDILPWLNVIVERPLSWRLNDEILMKITSKANGRLKTLALINCMRVTDEGLQRVVEQNPLINKLHIPACTGITPEGVLRAVKTLCQRSNCLKTLSINGIYNVQKEHLDMLTMNLGKNLPLEEQQKKQPVYYHDRGSFSVFKHDESRWLIDLEICPRCFEVRMVYDCPKGHCMRRECPLAPCRGCKFCIPRCVNCGGCIESGEVEEGACEDILCLECWLQLPKCSFCNKPYCKQHTNWWCTSPDSSLICKVCDENSHGYTYTDVL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3394 317 Gene3D Ribonuclease Inhibitor 37 243 IPR032675 -
Ssu5g3394 317 PANTHER F-BOX PROTEIN SKIP28 11 310 - -
Ssu5g3394 317 SUPERFAMILY RNI-like 75 173 - -
Ssu5g3394 317 Pfam F-box domain 22 57 IPR001810 GO:0005515
Ssu5g3394 317 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 11 310 - -
Ssu5g3394 317 SUPERFAMILY F-box domain 22 71 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3394 Ssu-Chr5 84190434 84191843 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3394 - - vra:106769044 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3394 5 84190434 84191843 Ssu5g3394 5 84190434 84191843 ECH