Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3393 ATGGAAGGTGCAGAGGAGGAGCTAGAAAGAAGAAGCAGGTTTCTCAAAAGCTTGATACAGAAGAAGAAAGCCATAGAGCAACAAGAACAGAATGATCACCTACAAAAACATAACGTTCGTGTCAGAGCTTGTGACATGCCTCTCCCTCTTCAGAACCGTGCCTTTCGTTGTGCACGTGATCTCCTGGATTCTATGCCACCAAAGAAGCTTGATAGTAAACGCCTGGCCCTCACACTTAAGAAGGAATTTGATTCTTCGTATGGTCCAGCTTGGCACTGCATTGTGGGTACTAGTTTTGGCTCCTATGTTACTCATTCTCTTGGTGGTTTCGTGTATTTTTCCATTGACAAGGTTTATATCCTTCTCTTCAAGACAGCTGTTGAACCATTAGACCATTGA 399 0.4361 MEGAEEELERRSRFLKSLIQKKKAIEQQEQNDHLQKHNVRVRACDMPLPLQNRAFRCARDLLDSMPPKKLDSKRLALTLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFVYFSIDKVYILLFKTAVEPLDH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3393 132 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 21 126 IPR037177 GO:0007017|GO:0030286
Ssu5g3393 132 PANTHER DYNEIN LIGHT CHAIN 1 131 - -
Ssu5g3393 132 Pfam Dynein light chain type 1 39 125 IPR001372 GO:0007017|GO:0030286
Ssu5g3393 132 PANTHER DYNEIN LIGHT CHAIN 1 131 IPR001372 GO:0007017|GO:0030286
Ssu5g3393 132 SUPERFAMILY DLC 34 125 IPR037177 GO:0007017|GO:0030286
Ssu5g3393 132 SMART Dynein_light_2 34 125 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3393 Ssu-Chr5 84186745 84188501 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3393 K10418 - gmx:100805980 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3393 5 84186745 84188501 Ssu5g3393 5 84186745 84188501 ECH