Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3391 ATGTCTCAACCAAACTCCCAAGGTGAACAACAGTCCTCTGCCCCTGGTTTTCCTGTGGCTTACAGCAAAAACCCGCATCCCCAGCCCAAAGCCCAGGATGATTGGTCCACGGGCCTCTGTGATTGCTTCTCCAACTTCAAAAACTGTTGCATGACGTGCTGGTGTCCATGTATTACGTTTGGTCAAATTGCAGAGATTGTTGACAAGGGAGAAACTACACGTGGTGCTAGTGGGGCCCTGTATACGCTGGTTGGTTGTGGTTGGTTACACTCCTGCTTCTACCGCACCAAGATGAGACGACAATACATGTTGAAGGAGAGCCCTTGTTGGGATTGCTTGGTTCATTTCTGCTGCGAACCCTGCGCCTTGTGCCAAGAATATCGTGAACTTGAAAACCGCGGATTTGACATGATCATTGGGTGGCAAGGAAATGTTGAGCAAGGGAACCAGGGAGGAACCAGGGAGTAG 468 0.5021 MSQPNSQGEQQSSAPGFPVAYSKNPHPQPKAQDDWSTGLCDCFSNFKNCCMTCWCPCITFGQIAEIVDKGETTRGASGALYTLVGCGWLHSCFYRTKMRRQYMLKESPCWDCLVHFCCEPCALCQEYRELENRGFDMIIGWQGNVEQGNQGGTRE 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3391 155 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 1-RELATED 5 150 - -
Ssu5g3391 155 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 34 132 IPR006461 -
Ssu5g3391 155 MobiDBLite consensus disorder prediction 1 30 - -
Ssu5g3391 155 PANTHER DUF614 FAMILY PROTEIN-RELATED 5 150 IPR006461 -
Ssu5g3391 155 Pfam PLAC8 family 35 129 IPR006461 -
Ssu5g3391 155 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3391 Ssu-Chr5 84170138 84171592 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3391 - - gmx:100818949 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3391 5 84170138 84171592 Ssu5g3391 5 84170138 84171592 ECH