Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu5g3358 | ATGAATAGCTACTATGGGTGCCAAGAGAAGAACACCTTGACAAGCTGTGAGGAGATGAGGATGGAATCAGTGATTTGCCCCAAACCTCGCCGTTTGGCTCTCATAAACCACTCTTCCATCAACACACACATCAGACCCTTGAGGCACCCTATCAGcTGCCAATCTGAGGCGGAAGATTCAGGAGTTGGGGCAGAGCTTCTGGACATCATCCTCCCCAAGGAAAACTGCTATGTAGAAAGATCCGGAGGCCAATTGGTGACATCATCACCACCATTTTTCTGTGGATCTCCTCCTAGCAGGGCCTCAAACCCTCTAATTCAAGATGAGCAATTTGGTAATGGGAATTTTAGTCCATTTACCGAGGCATCCTCTCTTCAGCTCGTGGTTGTGTTCCGATGA | 399 | 0.4812 | MNSYYGCQEKNTLTSCEEMRMESVICPKPRRLALINHSSINTHIRPLRHPISCQSEAEDSGVGAELLDIILPKENCYVERSGGQLVTSSPPFFCGSPPSRASNPLIQDEQFGNGNFSPFTEASSLQLVVVFR | 132 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu5g3358 | 132 | PANTHER | EXPRESSED PROTEIN | 1 | 122 | - | - | |
| Ssu5g3358 | 132 | PANTHER | - | 1 | 122 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu5g3358 | Ssu-Chr5 | 83508641 | 83509799 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu5g3358 | - | - | gmx:100306293 | 221.09 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ssu3g0068 | 3 | 1337906 | 1339022 | Ssu5g3358 | 5 | 83508641 | 83509799 | ECH | |
| Ssu7g0319 | 7 | 5392202 | 5392963 | Ssu5g3358 | 5 | 83508641 | 83509799 | ECH | |
| Ssu5g3358 | 5 | 83508641 | 83509799 | Ssu5g3358 | 5 | 83508641 | 83509799 | ECH | |
| Ssu5g3358 | 5 | 83508641 | 83509799 | Ssu5g3358 | 5 | 83508641 | 83509799 | PCT |