Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3346 ATGTCACCGGAGCATTTTGTTGACAGCGTTTTGGTTTCCATGCACATATCTTCGCCACCTAATCCGCACTTTATGAGGCATGATGAAAGTTATATGTCAATCTCAGAAATGAATTGCACAAAGAACGGGCATTTGCTTAAATGGGATCAATTTAAGATAATACGAGGTATATTAGCCAAGAAATATTCAAATGCTGAAGTTATAGACAAAGGAAGAACATCTTGTGCACTTGCGGGCTTCATCTTCTATGGGCTTAACTATATCGCCGGGCTTGGATGTTTATATTCTTACACATTCAGAAGCAAACTAAGAGGCCTCTACTCCTTACCAGAAGAACCATGCATGGACTTCTGCGTTCATTGCTTCTGCGCTTATTGTGCTATTTGCCAAGAGTACAGGGAACTTAAAAACCGTGGATTGGACCCCTCAATagGTTGGACAGGCAATGAGGAAAAAACGAACAGAGCCAATCAAGTGCCACCAAATGTCGCACCGGGCATGACTCGCTAG 510 0.4235 MSPEHFVDSVLVSMHISSPPNPHFMRHDESYMSISEMNCTKNGHLLKWDQFKIIRGILAKKYSNAEVIDKGRTSCALAGFIFYGLNYIAGLGCLYSYTFRSKLRGLYSLPEEPCMDFCVHCFCAYCAICQEYRELKNRGLDPSIGWTGNEEKTNRANQVPPNVAPGMTR 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3346 169 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 12 63 165 - -
Ssu5g3346 169 PANTHER DUF614 FAMILY PROTEIN-RELATED 63 165 IPR006461 -
Ssu5g3346 169 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 63 137 IPR006461 -
Ssu5g3346 169 MobiDBLite consensus disorder prediction 148 169 - -
Ssu5g3346 169 Pfam PLAC8 family 63 134 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3346 Ssu-Chr5 83132911 83138773 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3346 - - pper:18777986 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3346 5 83132911 83138773 Ssu5g3346 5 83132911 83138773 ECH