Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3050 ATGACCACCAAAGATCCCAACTCCGTCTTCGATTTTACTGTCAAGGATGCTAAAGGCGATGGTGTGGATCTTGCCACTTACAAGGGAAAAGTCTTGCTGATTGTTAATGTTGCTTCCAAATGTGGCATGACCAACTCAAATTATGTGGAGTTGAATCAACTATATGAGAAGTACAAAGACAAAGGGCTGGAGATTCTGGCATTTCCATGTAACCAATTTGGTGAGGAAGAACCCGGGAGCAATGATCAAATTAAGGAGTTTGTCTGCACTCGCTTTAAATCTGAATTTCCCATCTTTGATAAGATTGAAGTGAATGGGGACAATTCTGCTCCTTTGTATAAATTCTTAAAGTCAGGTAAGTGGGGAATTTTTGGGGATGATATTCAGTGGAACTTTGCCAAGTTTCTGGTTGACAAGGATGGGCAAGTGGTAGACCGCTATTATCCCACGACATCTCCTCTTAGCCTCGAGCGAGACATCCGTGAGCTAATTGGTATTGTATGA 504 0.4206 MTTKDPNSVFDFTVKDAKGDGVDLATYKGKVLLIVNVASKCGMTNSNYVELNQLYEKYKDKGLEILAFPCNQFGEEEPGSNDQIKEFVCTRFKSEFPIFDKIEVNGDNSAPLYKFLKSGKWGIFGDDIQWNFAKFLVDKDGQVVDRYYPTTSPLSLERDIRELIGIV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3050 167 Gene3D Glutaredoxin 1 166 - -
Ssu5g3050 167 CDD GSH_Peroxidase 8 160 IPR000889 GO:0004602|GO:0006979
Ssu5g3050 167 PANTHER GLUTATHIONE PEROXIDASE 3 166 IPR000889 GO:0004602|GO:0006979
Ssu5g3050 167 PANTHER GLUTATHIONE PEROXIDASE 8-RELATED 3 166 - -
Ssu5g3050 167 Pfam Glutathione peroxidase 9 117 IPR000889 GO:0004602|GO:0006979
Ssu5g3050 167 ProSitePatterns Glutathione peroxidases active site. 29 44 IPR029759 -
Ssu5g3050 167 ProSiteProfiles Thioredoxin domain profile. 3 165 IPR013766 -
Ssu5g3050 167 PRINTS Glutathione peroxidase family signature 63 79 IPR000889 GO:0004602|GO:0006979
Ssu5g3050 167 PRINTS Glutathione peroxidase family signature 27 44 IPR000889 GO:0004602|GO:0006979
Ssu5g3050 167 PRINTS Glutathione peroxidase family signature 128 137 IPR000889 GO:0004602|GO:0006979
Ssu5g3050 167 PIRSF Glutathion_perox 2 165 IPR000889 GO:0004602|GO:0006979
Ssu5g3050 167 ProSiteProfiles Glutathione peroxidase profile. 1 167 IPR000889 GO:0004602|GO:0006979
Ssu5g3050 167 ProSitePatterns Glutathione peroxidases signature 2. 66 73 IPR029760 -
Ssu5g3050 167 SUPERFAMILY Thioredoxin-like 8 164 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3050 Ssu-Chr5 77925797 77927526 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3050 K00432 - gmx:100808523 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2862 2 89713846 89716113 Ssu5g3050 5 77925797 77927526 PCT