Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2963 ATGGCGTTCTCATCGTCCCTATGGTCTTCCCTCTTCGTTCCGAACCCAAACAGAACCAACATTCTCCCTCGATTCTCTCACAAATCCTCCAAGCCTCCGCTCTCGCCGGCCTTCGCCATCCCCCCGCTGTCCACCGCCACCGCCGCCGACGTCTCCGGCGCCATCGACGGGACCACCGTGGCGGTCGTGAGCGGGGGGTTCGTGGCGGCGCTGGCGGCGGTGCTGTCGCTGACGGACCCGGAGCGGCGGCGGAAGATGCAGGCGGAGGAGGTGGGCGGCGGCGACAAGGAGGTGGTGAGGGAGTACTTCAACAACTCCGGGTTCCAGCGGTGGAAGAAGATTTACGGCGACACCGACGAGGTGAACCGGGTTCAGAGGGACATTAGGCTGGGCCACTCCAAGACCGTGGAGAGCACGCTGCTGATGTTGAAGGACGAAGGGTCGCTTCAGGGCGTTACGGTTTGCGACGCCGGCTGCGGCACGGGCTCGCTCTCGATTCCCCTCGCCAAAGAAGGCGCTGTTGTGTTCGCCAGTGATATCTCCGCCGCTATGGTTGCTGAAGCTGAGAAACAGGCAAAAGAACAACTTGTGGCCAGTGAAGATGGATCTGCGCCTGTGATGCCGAAGTTTGCAGTGAGGGATTTGGAGAGCTTGGATGGCAAGTATGACACGGTGGTCTGCCTTGATGTTTTGATTCATTACCCCCAAAGTAAAGCGGATGGGATGATTGCCCACCTTGCATCATTGGCCAACAACCGATTGATTCTGAGTTTTGCCCCAAAGACATTTTATTATGATCTCCTAAAGAGGGTTGGAGAGTTGTTCCCTGGGCCTTCAAAGGCAACAAGGGCATATCTTCACTCCGAGGCAGATGTAGAGAGAGCATTGCAAAAGGTTGGCTGGACCATAAGGAGGAGAGGCTTAACCACTACTCAATTTTACTTTGCTAAGCTTATTGAGGCCGTTCCTATGTAG 975 0.5672 MAFSSSLWSSLFVPNPNRTNILPRFSHKSSKPPLSPAFAIPPLSTATAADVSGAIDGTTVAVVSGGFVAALAAVLSLTDPERRRKMQAEEVGGGDKEVVREYFNNSGFQRWKKIYGDTDEVNRVQRDIRLGHSKTVESTLLMLKDEGSLQGVTVCDAGCGTGSLSIPLAKEGAVVFASDISAAMVAEAEKQAKEQLVASEDGSAPVMPKFAVRDLESLDGKYDTVVCLDVLIHYPQSKADGMIAHLASLANNRLILSFAPKTFYYDLLKRVGELFPGPSKATRAYLHSEADVERALQKVGWTIRRRGLTTTQFYFAKLIEAVPM 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2963 324 PANTHER METHYLTRANSFERASE 60 321 - -
Ssu5g2963 324 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 88 306 IPR029063 -
Ssu5g2963 324 CDD AdoMet_MTases 153 258 - -
Ssu5g2963 324 Gene3D Vaccinia Virus protein VP39 92 324 IPR029063 -
Ssu5g2963 324 PANTHER MAGNESIUM PROTOPORPHYRIN IX METHYLTRANSFERASE, CHLOROPLASTIC-RELATED 60 321 - -
Ssu5g2963 324 Pfam Magnesium-protoporphyrin IX methyltransferase C-terminus 227 322 IPR010940 GO:0015995|GO:0046406
Ssu5g2963 324 ProSiteProfiles Magnesium protoporphyrin IX methyltransferase (EC 2.1.1.11) family profile. 2 323 IPR010251 GO:0015995|GO:0046406
Ssu5g2963 324 TIGRFAM BchM-ChlM: magnesium protoporphyrin O-methyltransferase 95 320 IPR010251 GO:0015995|GO:0046406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2963 K03428 - gmx:100819913 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2963 5 76478143 76480777 Ssu5g2963 5 76478143 76480777 ECH