Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2864 ATGGTGGGTGCATGCAGAGCAGCCATTTCCCATATTCCTCCGCGGAAGCCAAAAGCCAAAGTCCAGGACTCTCGGAGTAAAGCATCACCACCTATTTTTAGAGCTCAGCTTCCAAGTAGGCGTTTGTTCCTCTTCTCTCTGCCCCTCTCTAGTTTCCTTCTCCTTCCTGTTCCTAGTTTTGGTGATGGTAACAGTGCAACTAGTGATAAATTTCAACATGGGTCTTCTTCATATGCTGCCACACTGTATGACCCAGTAAGTCCTTCTGAAAGAGAAGCAAGTGCTTTAGTTTCACAAAGAGTGTCTCAAGCAGTGGAGCTGTTGGAGAAGGGGAGGGAATTGCAGGCTCAGGGTGACTTTAACCGTGCCCTTGATTACTTTTCTCAGGTTATTGAAAGCTACAAAGACTTGGCATTCTCAGAGTATGCAAGGGTAGGAAGAGCATTGGCCCTGTATGAAGTTGGTGACAGAGAAGAAGCAATTGCAGAGATGGAAGACGTTTCAATATCTCTAAAAGGGTATCCAGAAATACATGCAGCTCTTGCAGCAGCCTTATACGAAGATAAGCATGCCGCTTTGCTTGCTGAAAACCAGTTTGCCATTGCAACTCTGCTTGATCCCCATTTTACAGACCTTTCATATGTTCGAGACACAAAGCACTGGCCTCCAAGTTTGATCAGTTCTCTGCAGCACTTCATCACACTATCTTAA 711 0.4543 MVGACRAAISHIPPRKPKAKVQDSRSKASPPIFRAQLPSRRLFLFSLPLSSFLLLPVPSFGDGNSATSDKFQHGSSSYAATLYDPVSPSEREASALVSQRVSQAVELLEKGRELQAQGDFNRALDYFSQVIESYKDLAFSEYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEIHAALAAALYEDKHAALLAENQFAIATLLDPHFTDLSYVRDTKHWPPSLISSLQHFITLS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2864 236 PANTHER EXPRESSED PROTEIN 3 236 - -
Ssu5g2864 236 SUPERFAMILY TPR-like 97 211 IPR011990 GO:0005515
Ssu5g2864 236 MobiDBLite consensus disorder prediction 1 30 - -
Ssu5g2864 236 Pfam Tetratricopeptide repeat 116 183 - -
Ssu5g2864 236 Gene3D Tetratricopeptide repeat domain 94 216 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2864 - - gmx:100500132 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2864 5 75016600 75019907 Ssu5g2864 5 75016600 75019907 ECH