Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2845 ATGGCACTCTCCAcccctctcttctctttctcttcttctctctattcaTCTTCGCCTCTGTGTCTTCCAAAGCCCCTCTCCCCTTCCTTGACACTTGCCAATTCAACCTCCTACGCCAATCTCGCTGTTCGCTCTTCTTATTCCGAAATGGGCTCTTCCCCCGAGCCCATCAATTTCAGGAAGCCCGAGATTCCGTCCATGTCTCGCTTGGGACTCTCAATGAATGAAACCAACAAGCCATCCTACAAATGGCGAAGGGTTTTGCTCAAAGTCAGCGGAGAAGCGCTTGCAGGAGACCACTCTCAGAATATTGACCCAAAGATAACCATGGCCATTGCAAGGGAGGTGGCAGCTGTGACTCGCCTTGGCATTGAGGTTGCACTCGTAGTTGGCGGGGGTAACATCTTCCGCGGATCCTCCTGGGCTGGAAGTGGTGGACTAGACCGCTCATCTGCTGATTATATTGGGATGTTGGCCACTGTCATGAATGCTATATTTCTTCAAGCAACAATGGAGAGTATTGGCATTCCTACAAGGGTGCAGACTGCATTTCGCATGTCTGAGGTTGCAGAACCATATATACGCAGAAGGGCTGTGAGGCATTTGGAAAAAGGCAGGGTTGTCATTTTCGCTGCTGGAACTGGAAATCCATTCTTTACCACAGACACTGCTGCAGCACTCCGATGTGCAGAGATTAATGCAGAGGTTGTACTGAAAGCAACAAACGTTGATGGAGTTTATGATGAGGACCCGAAGCGTAATCCACATGCACGTCTTCATGACACGCTAACCTATCAGGAGGTAACTTCAAAAGATCTGTCAGTGATGGACATGACTGCCATAACATTATGCCAGGAAAATAATATACCTGTTGTTGTCTTCAATCTAAACGAACCTGGAAACATTGAGAAAGCTATTAAAGGCGAAAGAGTTGGCACTTTGATTGGGGCAACCTGGAATTCTACCGTATCAAgaacatga 981 0.4577 MALSTPLFSFSSSLYSSSPLCLPKPLSPSLTLANSTSYANLAVRSSYSEMGSSPEPINFRKPEIPSMSRLGLSMNETNKPSYKWRRVLLKVSGEALAGDHSQNIDPKITMAIAREVAAVTRLGIEVALVVGGGNIFRGSSWAGSGGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDEDPKRNPHARLHDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNEPGNIEKAIKGERVGTLIGATWNSTVSRT 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2845 326 Pfam Amino acid kinase family 86 295 IPR001048 -
Ssu5g2845 326 Gene3D - 74 323 IPR036393 -
Ssu5g2845 326 SUPERFAMILY Carbamate kinase-like 82 315 IPR036393 -
Ssu5g2845 326 CDD AAK_UMPK-PyrH-Ec 85 316 IPR015963 GO:0005737|GO:0006221|GO:0033862
Ssu5g2845 326 TIGRFAM pyrH_bact: UMP kinase 85 315 IPR015963 GO:0005737|GO:0006221|GO:0033862
Ssu5g2845 326 PANTHER URIDYLATE KINASE 74 320 - -
Ssu5g2845 326 Hamap Uridylate kinase [pyrH]. 82 316 IPR015963 GO:0005737|GO:0006221|GO:0033862
Ssu5g2845 326 PANTHER AMINO ACID KINASE FAMILY PROTEIN 74 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2845 Ssu-Chr5 74618736 74621200 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2845 K09903 - gmx:100781745 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2845 5 74618736 74621200 Ssu5g2845 5 74618736 74621200 ECH