Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2821 ATGCCTAGTACTATATATACCACTCTCTGCATCACTGAATCAGCATCCACTAAAATCACCAAATTCCAAGTTATTCAACTTGAGCAGAAAGACATGGGCGCTATGTATCATATTATTCTTCTGATCATTGCTGTTTATGTTTCATTAGTCATGCATATCTCATCAAAGAGCACGCCAGTGGACTTGACACTCGGTTTCACTGAACTCCCACCGAGCATCTCCAATTTTAAACATGACAAGCCTTACAATTTACCCGTAAGAGAACGCTACAGCTTTAAAGATGGAGTACACAAGTTGTGGGTATACGCCACAGACAAACCTCTGTCCCCACTTAGCAAAACCAAACCTCGTTCAGAAATCCGCATTGAGGGCTACGATTATTCAAGTGGGGTGTGGCAATTTGAAGGGCAAGGTTTTGTGCCTAAGGGTACTTATGGGGTGTGCATTATGCAAGTGTTCGGGGCACACCCTAAACGCGCCACCACTCTTATGCTTGATGTTTATGACAACTCACTAATGTATTATAATCATTCTGTCCTGGTTCCAAACATACGGGACAGATGGTTCCAGTTAAATGTGATCCATGACGTGGAGGCCTCCAATGTGAAGATTTATGTTGACGGGGTTCAGGTTTATGAAGCACCGGGCCAGGGAGGGAGCTCCCATTATTTCAAATTCGGTGTCTACGCGCAAGATAATCCTTCTTGCTACATGGAGTCAAGGTGGAAAGGAATTAGAGCTCTAAGAAAGTCTTCATGA 759 0.4361 MPSTIYTTLCITESASTKITKFQVIQLEQKDMGAMYHIILLIIAVYVSLVMHISSKSTPVDLTLGFTELPPSISNFKHDKPYNLPVRERYSFKDGVHKLWVYATDKPLSPLSKTKPRSEIRIEGYDYSSGVWQFEGQGFVPKGTYGVCIMQVFGAHPKRATTLMLDVYDNSLMYYNHSVLVPNIRDRWFQLNVIHDVEASNVKIYVDGVQVYEAPGQGGSSHYFKFGVYAQDNPSCYMESRWKGIRALRKSS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2821 252 PANTHER CITRATE-BINDING PROTEIN-LIKE 43 251 - -
Ssu5g2821 252 SUPERFAMILY Concanavalin A-like lectins/glucanases 83 235 IPR013320 -
Ssu5g2821 252 Gene3D - 99 246 - -
Ssu5g2821 252 Pfam Alginate lyase 87 246 IPR014895 -
Ssu5g2821 252 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 43 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2821 Ssu-Chr5 74266953 74267972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2821 - - gmx:100803497 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2821 5 74266953 74267972 Ssu5g2821 5 74266953 74267972 ECH