Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2669 ATGTGGTGGATGATGGGCGAGACTGGAGGGAATTACTGCTCTAAGAAGAGCGATGATTTGTGCAGCAATGTTTGTGGTCAGGAATCAAGTCAAGTATCGGGCATGTCGAGAATTCGCTGCATTCTGCGTGGTTTGGATGTCAAAACCTACATATTCATGTTTGCTGTTGTCCCTATGTGCATATTTGGAATCTATATACATGGGCAGAAGATCTCCTACTTTCTGCGACCGCTATGGGAAAAACCACCGAAGCCTTTCAATGTCATCCCTCATTACTATAATGAAAATGTCACCATGGAGAATCTCTGCAGACTTCATGGTTGGGGAGTCCGGGAGTACCCTAGGCGTGTTTATGATGCTGTCTTGTTTAGTAATGAGGTGGAGATACTTACCTTGCGCTGGAGAGAATTGTACCCTTACATAACAGAATTTGTTCTCCTTGAGTCAAATTCTACATTTACTGCATTGCCCAAGCCTCTGGTTTTCGATAGCAATAGGGAGCAGTTCAGATTTGTCGAGCCCCGGTTAACTTATGGGACCATTGGTGGGAGATTTAAGAAAGGAGAAAACCCATTTGTTGAGGAGGCATATCAGCGTGTGGCGTTGGACCAGCTCCTCAAGATAGCTGGTATTACTGATGATGACTTGTTGATTATGTCTGATGTGGATGAGATACCAAGTGCTCACACTATTAACCTCTTGAGGTGGTGTGATGAAATACCCTCAGTCCTTCATCTGCAGCTGAAAAATTATCTCTATTCATTTGAATTTCGTGTGGATGATAATAGCTGGAGGGCTTCAATTCACAGGTATCAGACTGGTAAGACAAGGTATGCACATTATCGCCAGTCTGATAACATATTGGCAGATGCTGGCTGGCATTGTAGCTTTTGCTTCCGTCGAATCAGCGATTTCATTTTCAAGATGAAAGCCTACAGCCATTATGATAGAGTCAGGTTCTCTCATTATTTAAATCCTGAAAGAATTCAGAGAGTAATCTGCAAAGGGGCTGATTTATTTGATATGCTGCCGGAGGAGTACACTTTCAAGGATATCATTGGTAAAATGGGACCAATACCCCATTCCTATTCTGCTGTTCATCTTCCTGCTTTTCTTCTGGAAAATGCTGAGaagtataaatttcttttgccTGGAAATTGCAAGAGAGAGAGATGA 1176 0.4218 MWWMMGETGGNYCSKKSDDLCSNVCGQESSQVSGMSRIRCILRGLDVKTYIFMFAVVPMCIFGIYIHGQKISYFLRPLWEKPPKPFNVIPHYYNENVTMENLCRLHGWGVREYPRRVYDAVLFSNEVEILTLRWRELYPYITEFVLLESNSTFTALPKPLVFDSNREQFRFVEPRLTYGTIGGRFKKGENPFVEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSAHTINLLRWCDEIPSVLHLQLKNYLYSFEFRVDDNSWRASIHRYQTGKTRYAHYRQSDNILADAGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPERIQRVICKGADLFDMLPEEYTFKDIIGKMGPIPHSYSAVHLPAFLLENAEKYKFLLPGNCKRER 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2669 391 Pfam Glycosyltransferase family 17 45 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
Ssu5g2669 391 PANTHER BETA-1,4-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 391 - -
Ssu5g2669 391 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 1 391 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2669 Ssu-Chr5 71798167 71800175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2669 1 390 Glycosyltransferase AT1G12990 78.974 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2669 K00737 - gmx:100787062 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2669 5 71798167 71800175 Ssu5g2669 5 71798167 71800175 ECH