Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2662 ATGCTTTACTGTGCAGCGAGCGCAGGTGTTACTCATACTCCTCCACACACACTCACTCTCTGCCCCCTCAAATCCCCTCGACTTTTCTCAAATTCGGTTAGCCTCCCTCACACCCCTATCCTCACTCCCTCCTGCTTCCTCCAAACCCTCAACGCCAACCCTACCTCCGATTCCGATGACGCCCTCCGCCTCATGGTGCCTTCTGCCGCCGCAGTCGCCTCCGCCATTCGCAAAGCCTCCACCTCCTCCGTCGAGTTCACCCAGCGACTCGAGAAGGACCGCCAGAGCGGACTCGTGCTTCCCAGCACCGACTTCCACCGACTCTGTCTCCACCAGCTCCACCTCTTTCGCAGGATCGTTCCCGAAGCTCTCCTCTCGGTGTATGTTAGACCAGCTGGTAGTTATGTGATGGATCGGTTGGAGCTGCGGCGGGTTGCACTGTACCCTGGAGATGCAGAGGCAGAGGGCATTGTCATTCTTGTGGGTCATTTTAATATTCCTGCAGGCTTGCGTGCTGCCGAGGCCACGCTTTCCAATTTGCAAGTTAATGTTGTCCCTGAATGTAAGGCTGTGGTTCTTCCAATGGTGAAACACCCCTTTGTTGTTGGTTTCTTGGTTGCCGAGCTTCCATTGGTGGAGCTGGAACAGTGTCAGAAACCTCAAAGTGATGGGCCAGATAACCGCATGTCTGTTGAGGAACCTTATTCTTTGCCTCCCTTTTTGGATTTAGATAAGAAGTCGAGGGAAATTGAGACTCTCCAGGTCAAGGATGAGGCAGTTAGTATGCGTAACTTCAGTTCTGAGCAAAGATCAAATGCTGTCAACATTTCACAGTCTCTAGCTATGGCATATGTCATGGATCAGAAAGCAATGTTACTTCAGCAATCAACATGGCAAAATAATGTCAGGATGGGTAATCTGGTTGAGCAAaTCCGTGGTCCACTTTCAAGTATTCAAACCTTAAGTAAAATCCTGTCTACACAGACAAAGAGAACTCAGATTTCATATGACATTGTTGAAGACCTCTTGGTGCAAGGTGATCGTCTGAGGGATGTTCTCCAACAACTCCAGGATGCTGTTTATTTGACAAAGACTAATATAGTGCGCTACAATGAAGAAGCAATCAAGAAAATGAATGGTTCTACTCACATACTTGCTGAATCAGCAAGATCTCAATTGTTAGATAGCTCTCCAGGGGATGCCTCtgcaaataaaatgaaaaaatctaGTGAGTCACTTTCTCTAAGTGCTGCTGTCCAGGATATAGAGATGCCACTACCACCTTTGGCCCTTGCTCCATTGCAACATGGAATCAGACCATGCAATGTTTCTGAAGTATTGGCAGACTTGGTTGATTCAGTGAGACCTCTTGCCCAGAGTCAGAAACGTGTAGTAGAATTAAGTGAACTCTCATCACCTTTGCTAGCTGCTGTAGAAGAACCCGCGTTGCGCCAGGCTTTCAGCAATCTTATCGAAGGTGCTTTACTACGCACACATGTTGGAGGAAAGGTTGAAATTGTATCTACTACAGCACCTGCTGGTGGTACCCTTGTACTTATTGATGATGATGGACCTGATATGCACTACATGACTCAGTTGCACTCACTCACACCTTATGGACAAGAACTGTCGTCTGATGATATGATTGAAGACAATATGACTTGGAACTTTGTTGCTGGGCTGACTGTTGCCCGTGAGATACTAGAGAGTTATGGCTGTGTCGTCCGCATTGTTTCACCTCGGATTAAAGATGCTCCGCTTGGTGCTGGGGGAACTCGTGTGGAACTCTGGCTTCCTTCGTCAATTGTAAAATCTGATTTGAGCAGCCACGCCCAAGAGGTATAG 1845 0.4759 MLYCAASAGVTHTPPHTLTLCPLKSPRLFSNSVSLPHTPILTPSCFLQTLNANPTSDSDDALRLMVPSAAAVASAIRKASTSSVEFTQRLEKDRQSGLVLPSTDFHRLCLHQLHLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGDAEAEGIVILVGHFNIPAGLRAAEATLSNLQVNVVPECKAVVLPMVKHPFVVGFLVAELPLVELEQCQKPQSDGPDNRMSVEEPYSLPPFLDLDKKSREIETLQVKDEAVSMRNFSSEQRSNAVNISQSLAMAYVMDQKAMLLQQSTWQNNVRMGNLVEQIRGPLSSIQTLSKILSTQTKRTQISYDIVEDLLVQGDRLRDVLQQLQDAVYLTKTNIVRYNEEAIKKMNGSTHILAESARSQLLDSSPGDASANKMKKSSESLSLSAAVQDIEMPLPPLALAPLQHGIRPCNVSEVLADLVDSVRPLAQSQKRVVELSELSSPLLAAVEEPALRQAFSNLIEGALLRTHVGGKVEIVSTTAPAGGTLVLIDDDGPDMHYMTQLHSLTPYGQELSSDDMIEDNMTWNFVAGLTVAREILESYGCVVRIVSPRIKDAPLGAGGTRVELWLPSSIVKSDLSSHAQEV 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2662 614 CDD HATPase 483 598 - -
Ssu5g2662 614 Gene3D - 433 600 IPR036890 -
Ssu5g2662 614 Coils Coil 339 359 - -
Ssu5g2662 614 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 438 599 IPR036890 -
Ssu5g2662 614 PANTHER CHLOROPLAST SENSOR KINASE, CHLOROPLASTIC 43 609 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2662 - - gmx:100792515 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2662 5 71566409 71585210 Ssu5g2662 5 71566409 71585210 ECH