Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2661 ATGGCAGAGAAATGGATGCAAATTGTGACGTGGGTTGTAATTTCAACAACACTAATGCGGAGTGTTCTCATCCGTGGAAGCGGTCTCTCAGCGGCGTTCGGACAAGCTCCTCCCCCCAACGGAATCACTTTTTTCCACTCCCCTCACGGACGCTTCTCCGATGGTCGTCTCATCATCGATTTTATAGCGAAGACCTTGGGCTTGCCTTATCTGAGTGCTTACTTGGACTCGGTGGGTTCAAACTTCAGTCACGGAGCCAATTTCGCAACAGCCGGATCCACTGTCAGACCTCAGAACACAACTACGTCTCAGAGCGGATACAGTCCCATTTCCCTAGACGTTCAGTTTGTGCAGTTCTCTGATTTCAAAACCAGATCCAAATTGGTTCGCAAGCAAGGAGGGCTGTTTAAGGAATTGTTGCCCAAGGAGGAGTACTTCTCTCAGGCCCTATACACCTTTGATATTGGCCAAAATGATCTCAGTGCTGGCTACAAACTGAACTTGACCACAGAACAAGTCGAGGCATATTTACCTGATGTATTGGGCCAGTTCTCCAATGTTATAAAGGGTGTGTATCGGGAAGGGGGAAGGTCATTTTGGATATACAACACAGGCCCACTAGGATGCCTGCCATACATGCTGGATCGCTATCCCATGAAACCAGCCCAAATGGATAAGTTTGGGTGTGCCAAGCCATTCAACGAGGTGGCCCAATATTTTAATCGTAAATTAAAGGAAGCTGTTGAGCAACTGAGGGAAGAATTGCCTGAGGCTGCAATCACCTATGTTGATGTGTATACGGTGAAGTACACCCTCATCAACCATGCCCAAAAATACGGCTTCGAGCAGGGTGTGATAGCATGCTGTGGACACGGTGGGAAATACAACTTCAATAATAAAGCGAGATGTGGAGCAACCAAGAGGGTGAATGGGACAGAGGTTGTGATAGCCAAACCGTGCAAAGATCCAAGTGTGAGGATTATTTGGGACGGAATCCATTACACCGAAGCTGCTAATAATTGGATCTTCCAACAAATAGTCAATGGCTCCTTTTCAGATCTATCTACCTCTTTAAAAAGGGCTTGTTATGGTAAATCGTCCATCCACCGCGATTAA 1116 0.4677 MAEKWMQIVTWVVISTTLMRSVLIRGSGLSAAFGQAPPPNGITFFHSPHGRFSDGRLIIDFIAKTLGLPYLSAYLDSVGSNFSHGANFATAGSTVRPQNTTTSQSGYSPISLDVQFVQFSDFKTRSKLVRKQGGLFKELLPKEEYFSQALYTFDIGQNDLSAGYKLNLTTEQVEAYLPDVLGQFSNVIKGVYREGGRSFWIYNTGPLGCLPYMLDRYPMKPAQMDKFGCAKPFNEVAQYFNRKLKEAVEQLREELPEAAITYVDVYTVKYTLINHAQKYGFEQGVIACCGHGGKYNFNNKARCGATKRVNGTEVVIAKPCKDPSVRIIWDGIHYTEAANNWIFQQIVNGSFSDLSTSLKRACYGKSSIHRD 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2661 371 Coils Coil 241 261 - -
Ssu5g2661 371 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 27 363 - -
Ssu5g2661 371 Pfam GDSL-like Lipase/Acylhydrolase 37 346 IPR001087 GO:0016788
Ssu5g2661 371 CDD SGNH_plant_lipase_like 38 350 IPR035669 -
Ssu5g2661 371 Gene3D SGNH hydrolase 24 350 IPR036514 -
Ssu5g2661 371 PANTHER BNAA06G32900D PROTEIN 27 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2661 Ssu-Chr5 71558781 71561235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2661 46 354 Acyl Lipid Metabolism Gene Families AT4G10950 28.797 7.55e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2661 - - gmx:100803899 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2661 5 71558781 71561235 Ssu5g2661 5 71558781 71561235 ECH