Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2653 ATGTCTCGTCGAGAAACCAACCCTCATTTTTCTAGACCATCGCAGCCTGAATACGTAGATGATCACGATACTGAGCGACCACATATTCCAATTGCGCCGCCGCCACGCCATAAACGCCGTGGCCAACTATCCACACCAGGAGCTGCACCTATACCAGACGTATTGCGACCTCAGCATGAAGATCATGTTCCATTGAGAAGACAGCATGAAGACCATGTTTCATTCCAATCTGAGCTAGATGATCAAGATCATCCAAGCAAACCTGCTCTGCTAGAGCCACGCCGTGGCAAACCGCAACAAAGAAGTCCACGTAAACAGCCAACAAATCAAGGTTTGCGGCCAGTTCGGTCGAAGGTAAATTTTCAAGAGCCACCTCCCTTGGCTGAGGGCTTTCCGGCGGTGCCACCGCCTGACCATCCTCCCGAGCGTCGGCAGCAGCCACACCGCGATCACCGCCACCCGGCGGTGCCACCACCTGACCATCCTCCCGAGCGTCGGCAGCAGCCACACCGCCACCCCTACAGCCGGCCTAAGGAACAAAAGTCTCAACCCTTGACATGGTTGGGTGCTTGCTTGTGTGTAATATTTTGGCTTGTCATAATCATAGGAGGCCTAATAGTCCTTATAGTGTACTTTGTTTTTCGTCCCCAGAGTCCTCATTTTGATGTGTCTAGTGTCACCTTAAACGCTGCGTACCTTGACCTAGGATATCTGCTCAACGCTGATCTAACCATGCTGGCTAACTTCACAAATCCGAACAAGAAGGTACATGTGGACTTCAGCTCCGTGATCATTTATCTGTACTACGGAAGTTCCCTTATTGCCACCCAATATGTGGAGCCTTTCTCGGCTGCAAGGCTTCAATCAAGGTTTGCGAATATCCATATGATCTCTAGTCAAGTTCAGCTGCCATTAAGAGAGAGCCAGCGCCTTGTGAAACAAATGGAAAGCAATGGCGTTTTGCTTGAAGTGAGGGGAGTTTTCCGGGCAAGATCCAAATTGGGAAGCATCTTAAGGTATTCATATAATCTTTATGGCCGTTGCAACATCATGCTTACACGCCCTCCTGACGGCATCATGCTCAAAAAGAAATGCAGAACAAAGCGCTGA 1110 0.4982 MSRRETNPHFSRPSQPEYVDDHDTERPHIPIAPPPRHKRRGQLSTPGAAPIPDVLRPQHEDHVPLRRQHEDHVSFQSELDDQDHPSKPALLEPRRGKPQQRSPRKQPTNQGLRPVRSKVNFQEPPPLAEGFPAVPPPDHPPERRQQPHRDHRHPAVPPPDHPPERRQQPHRHPYSRPKEQKSQPLTWLGACLCVIFWLVIIIGGLIVLIVYFVFRPQSPHFDVSSVTLNAAYLDLGYLLNADLTMLANFTNPNKKVHVDFSSVIIYLYYGSSLIATQYVEPFSAARLQSRFANIHMISSQVQLPLRESQRLVKQMESNGVLLEVRGVFRARSKLGSILRYSYNLYGRCNIMLTRPPDGIMLKKKCRTKR 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2653 369 MobiDBLite consensus disorder prediction 1 179 - -
Ssu5g2653 369 MobiDBLite consensus disorder prediction 55 91 - -
Ssu5g2653 369 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 132 369 - -
Ssu5g2653 369 MobiDBLite consensus disorder prediction 102 116 - -
Ssu5g2653 369 PANTHER PROLINE-RICH RECEPTOR-LIKE KINASE 132 369 - -
Ssu5g2653 369 MobiDBLite consensus disorder prediction 141 178 - -
Ssu5g2653 369 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2653 Ssu-Chr5 71443580 71444689 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2653 - - gmx:100791466 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2653 5 71443580 71444689 Ssu5g2653 5 71443580 71444689 ECH