Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2652 atggcCGGCGCCGGCGACCTAGATGCCGATGCGGTGCTCAGCGACGTCGAGGACGACGGCGGCGATCCGATTCCGATTGCAAAAACTCCCTCGCCGGAAGACGTCTCCGTCGAGAAACTCCGGGAGGTTCTCGAGGAGCTCGATCGGGAGCGGCAAGCGCGCGTTGCCGCGGAGAATTCGAAGTCGGAGTTGCAGGTTTCGTTCAACCGATTGAAGGCGCTGGCGCACGAGGCGATAAAGAAGCGCGACGACTTCGGGCGCCAGCGCGACGACGCCGTTCGGGAGAAGGAGGAGGCGGCGAAGCAGCTCGAGGAAACCGCGAAGGAACGCGACGCGCTGCGATCTGAGATTGGGAATTCAAGCCACATGCTGGTCACCGGCATGGAGAAGATCTCGGCGAAGGTGAGCAGCTTCGCCGGCAACGCGCTGCCGCTGCCGCGGTCGCAGAAATACACCGGCATGGCGGCGGTGGCGTACGGCGTCATCAAGCGCGCGAACGAGATCGTGGAGGAGCTTTTGAAACAGAACGAGGTGACTGCGAAGGGTAGGAACGAGGCCAGGGAGCAGATGGAGCAGCGGAATTACGAGATTGCCATTGAGGTTTCTCAGCTTGAGGCCACGATTAGCGGTTTGAGGGACGAGGTTGCGAAGAAGGTTTCTGTTGTTGAGGGCTTGGAGAGGGATTTGGCGGTCAGGGATCAGAGGCTGAATGAGGTTTCGGAGAATTTGAGTAAGGAGCAAAGTGAGGCTTTGCAGTTGAGGGAGTTTGTTGGTGAGTGTGAGGACAAGTTGAGTAGGTTGGAGTCTCGGATGGAATCGCAAAGGCCTTTGTTGATTGGTCAGTTGAGCTTTGTTTCCAAAATTCATAACCAGATTTGCAATGTTGTTAAGATACTTGATGATGGTGGCACCGAGGAGCTGTCTGAATCGTTGTTTGTTCCTCAAGAAACGGATGTTGAGGAGAATATTCGTGCCTCTTTGGCTGGGATGGAGTCCGTATACGAGTTGACTAAGATTGTTGTTCAGAAAGCGAGGGATGTGGTTGAGGAGAAGGATCGTGAGATCAAGAGTTTGGATGAGATGGTGACTCGGTTGGTTCGGGAGAAGGATCAAATTGGTTCTTTGCTTAGGAGTGCTTTGTCTAAGAGGATGGCAATCGATCTGTCTTCTAGAAGGAGTGAGCTGTTTCAAGCTGCAGAGAATGGGTTGAGGGAGGCTGGGATAGATTTCAAATTCAGTAAGCTTCTTGGAGATGGAAAGGTTGCAGCTTCAAATGAGAAGACGGATAGAACTGAAAAAGAAGAGGAGGATGAAATATACTCTTTGGCTGGTGCTTTGGAGGATGTTGTTAAGGCATCTCAGCTTGAGATCATTGAGCTGCAGCATACTGTGGATGAATTAAGGGCAGAGTTGAACTTACTTAAGCAGCATATAGAAGCTCAGGCCAAGGAGCTTGACCATAGAATGCATCGGATAGAGGAACTTGAAGAGAAGGAGAGAGTGGCAAATGAAAATATTGAGGGGCTAATGATGGACATTGCTGCTGCTGAAGAAGAAATTAACAGATGGAAAGTGGCAGCAGAGCAAGAAGCTGCTGCAGGAAGAGGTGTTGAACAAGAATTTGTCGCACAGTTGTCAGCACTTAAGCAGGAACTtgaagaggcaaagcaatccaTGTTAGAATCACAgaagaaactaaaattcaaaGAAGAGACAGCAGCTGCTGCCATGGCAGCCAGAGATGCAGCAGAAAAGTCTCTTAAGTTAGCAGACTTGAGGTCATCTAGACTAAGAGACAGAGTTGAGGAGCTTACTCATCAGCTCGAAGAGTTTGAGAACAGGGAAGATTCAAGGGGCCGAAGTCGGCCTAGATATGTGTGTTGGCCATGGCAATGGCTCGGCATGGACTTTGTTGGACTTCAGCAGCGACCTGATACACAACAGGAGGCTTCTAACGAAATGGAACTTTCCGAACCTCTCTTATAA 1986 0.5 MAGAGDLDADAVLSDVEDDGGDPIPIAKTPSPEDVSVEKLREVLEELDRERQARVAAENSKSELQVSFNRLKALAHEAIKKRDDFGRQRDDAVREKEEAAKQLEETAKERDALRSEIGNSSHMLVTGMEKISAKVSSFAGNALPLPRSQKYTGMAAVAYGVIKRANEIVEELLKQNEVTAKGRNEAREQMEQRNYEIAIEVSQLEATISGLRDEVAKKVSVVEGLERDLAVRDQRLNEVSENLSKEQSEALQLREFVGECEDKLSRLESRMESQRPLLIGQLSFVSKIHNQICNVVKILDDGGTEELSESLFVPQETDVEENIRASLAGMESVYELTKIVVQKARDVVEEKDREIKSLDEMVTRLVREKDQIGSLLRSALSKRMAIDLSSRRSELFQAAENGLREAGIDFKFSKLLGDGKVAASNEKTDRTEKEEEDEIYSLAGALEDVVKASQLEIIELQHTVDELRAELNLLKQHIEAQAKELDHRMHRIEELEEKERVANENIEGLMMDIAAAEEEINRWKVAAEQEAAAGRGVEQEFVAQLSALKQELEEAKQSMLESQKKLKFKEETAAAAMAARDAAEKSLKLADLRSSRLRDRVEELTHQLEEFENREDSRGRSRPRYVCWPWQWLGMDFVGLQQRPDTQQEASNEMELSEPLL 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2652 661 PANTHER PARAMYOSIN 1 661 - -
Ssu5g2652 661 Coils Coil 538 572 - -
Ssu5g2652 661 Coils Coil 222 242 - -
Ssu5g2652 661 Coils Coil 594 614 - -
Ssu5g2652 661 MobiDBLite consensus disorder prediction 1 37 - -
Ssu5g2652 661 PANTHER OS08G0559800 PROTEIN 1 661 IPR040300 -
Ssu5g2652 661 Coils Coil 341 368 - -
Ssu5g2652 661 Coils Coil 37 60 - -
Ssu5g2652 661 Coils Coil 450 533 - -
Ssu5g2652 661 Coils Coil 89 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2652 Ssu-Chr5 71435436 71440633 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2652 - - gmx:100800693 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2652 5 71435436 71440633 Ssu5g2652 5 71435436 71440633 ECH